MicroRNA-based biotechnology for plant improvement (Q38218547)

31 August 2017

title

MicroRNA-based biotechnology for plant improvement (English)

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31 August 2017

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Baohong Zhang

1

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31 August 2017

Qinglian Wang

series ordinal

2

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31 August 2017

publication date

1 January 2015

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Journal of Cellular Physiology

31 August 2017

published in

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31 August 2017

volume

230

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31 August 2017

issue

1

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31 August 2017

page(s)

1-15

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Modulation of floral development by a gibberellin-regulated microRNA

31 August 2017

cites work

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Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

21 January 2018

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CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets

21 January 2018

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Genetic control of shoot organ boundaries

21 January 2018

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Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana

21 January 2018

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Diversifying microRNA sequence and function

21 January 2018

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miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data

21 January 2018

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Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes

21 January 2018

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Evolution of microRNAs and their targets: are all microRNAs biologically relevant?

21 January 2018

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ShortStack: comprehensive annotation and quantification of small RNA genes

21 January 2018

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Antiquity of microRNAs and their targets in land plants

21 January 2018

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The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.

21 January 2018

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MicroRNAs: genomics, biogenesis, mechanism, and function

21 January 2018

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Hormone interactions at the root apical meristem.

21 January 2018

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TAPIR, a web server for the prediction of plant microRNA targets, including target mimics.

21 January 2018

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Shoot meristem function and leaf polarity: the role of class III HD-ZIP genes

21 January 2018

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SUMO, a heavyweight player in plant abiotic stress responses

21 January 2018

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A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development

21 January 2018

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Identification of microRNAs in wild soybean (Glycine soja).

21 January 2018

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Real-time quantification of microRNAs by stem-loop RT-PCR

21 January 2018

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MiRGator v3.0: a microRNA portal for deep sequencing, expression profiling and mRNA targeting

21 January 2018

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The TCP domain: a motif found in proteins regulating plant growth and development.

21 January 2018

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Evolution and functional diversification of MIRNA genes

21 January 2018

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psRNATarget: a plant small RNA target analysis server

21 January 2018

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21 January 2018

Short RNAs in tomato.

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The F-box protein TIR1 is an auxin receptor

21 January 2018

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Profiling microRNAs and their targets in an important fleshy fruit: tomato (Solanum lycopersicum).

21 January 2018

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Computational identification of MicroRNAs in strawberry expressed sequence tags and validation of their precise sequences by miR-RACE.

21 January 2018

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MicroRNA: function, detection, and bioanalysis.

21 January 2018

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Identification and Dynamic Regulation of microRNAs Involved in Salt Stress Responses in Functional Soybean Nodules by High-Throughput Sequencing

21 January 2018

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Efficient silencing of endogenous microRNAs using artificial microRNAs in Arabidopsis thaliana.

21 January 2018

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RNA interference is mediated by 21- and 22-nucleotide RNAs

21 January 2018

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Genome-wide identification of miRNAs responsive to drought in peach (Prunus persica) by high-throughput deep sequencing

21 January 2018

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Radial patterning of Arabidopsis shoots by class III HD-ZIP and KANADI genes

21 January 2018

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High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes

21 January 2018

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MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana

21 January 2018

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Salt and drought stresses induce the aberrant expression of microRNA genes in tobacco

21 January 2018

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Discovering microRNAs from deep sequencing data using miRDeep

21 January 2018

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Overexpression of miR156 in switchgrass (Panicum virgatum L.) results in various morphological alterations and leads to improved biomass production

21 January 2018

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Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks

21 January 2018

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ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering

21 January 2018

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Over-expression of osa-MIR396c decreases salt and alkali stress tolerance

21 January 2018

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Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.

21 January 2018

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Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

21 January 2018

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Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

21 January 2018

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The putative miR172 target gene InAPETALA2-like is involved in the photoperiodic flower induction of Ipomoea nil.

21 January 2018

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A link between RNA metabolism and silencing affecting Arabidopsis development.

21 January 2018

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21 January 2018

The microRNA Registry

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miRBase: tools for microRNA genomics

21 January 2018

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LEUNIG and SEUSS co-repressors regulate miR172 expression in Arabidopsis flowers

21 January 2018

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21 January 2018

Auxin response factors

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MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development

21 January 2018

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miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments

21 January 2018

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Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica

21 January 2018

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Characterization of unique small RNA populations from rice grain

21 January 2018

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The Arabidopsis microRNA396-GRF1/GRF3 regulatory module acts as a developmental regulator in the reprogramming of root cells during cyst nematode infection.

21 January 2018

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Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence

21 January 2018

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miRspring: a compact standalone research tool for analyzing miRNA-seq data.

21 January 2018

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Small RNAs in tomato fruit and leaf development.

21 January 2018

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Molecular and genetic mechanisms of floral control

21 January 2018

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21 January 2018

The plant immune system

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microRNA-mediated repression of rolled leaf1 specifies maize leaf polarity.

21 January 2018

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MIR166/165 genes exhibit dynamic expression patterns in regulating shoot apical meristem and floral development in Arabidopsis

21 January 2018

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Regulation of barley miRNAs upon dehydration stress correlated with target gene expression

21 January 2018

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Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis

21 January 2018

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Auxin and the integration of environmental signals into plant root development

21 January 2018

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Resistance of Arabidopsis thaliana to the green peach aphid, Myzus persicae, involves camalexin and is regulated by microRNAs

21 January 2018

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MicroRNAs as regulators of root development and architecture.

21 January 2018

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Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

21 January 2018

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The microRNA156-SQUAMOSA PROMOTER BINDING PROTEIN-LIKE3 module regulates ambient temperature-responsive flowering via FLOWERING LOCUS T in Arabidopsis

21 January 2018

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The role of Mediator in small and long noncoding RNA production in Arabidopsis thaliana.

21 January 2018

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Role of AP2/EREBP transcription factors in gene regulation during abiotic stress

21 January 2018

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TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis

21 January 2018

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Identification of novel soybean microRNAs involved in abiotic and biotic stresses.

21 January 2018

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Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.

21 January 2018

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Identification of novel genes coding for small expressed RNAs

21 January 2018

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Regulation of the SQUAMOSA PROMOTER-BINDING PROTEIN-LIKE genes/microRNA156 module by the homeodomain proteins PENNYWISE and POUND-FOOLISH in Arabidopsis

21 January 2018

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Identification of novel MiRNAs and MiRNA expression profiling during grain development in indica rice

21 January 2018

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A microRNA-transcription factor module regulates lateral organ size and patterning in Arabidopsis

21 January 2018

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An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans

21 January 2018

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MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems

21 January 2018

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microRNA172 down-regulates glossy15 to promote vegetative phase change in maize

21 January 2018

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An extensive class of small RNAs in Caenorhabditis elegans

21 January 2018

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The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

21 January 2018

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Flowering time control in ornamental gloxinia (Sinningia speciosa) by manipulation of miR159 expression

21 January 2018

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The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance.

21 January 2018

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MicroRNA detection by microarray

21 January 2018

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Identification of soybean microRNAs involved in soybean cyst nematode infection by deep sequencing

21 January 2018

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Dicer-like (DCL) proteins in plants

21 January 2018

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The ARGONAUTE10 gene modulates shoot apical meristem maintenance and establishment of leaf polarity by repressing miR165/166 in Arabidopsis

21 January 2018

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Endogenous and silencing-associated small RNAs in plants

21 January 2018

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Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA

21 January 2018

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Nuclear export of microRNA precursors

21 January 2018

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Evolutionary conservation of microRNA regulatory programs in plant flower development

21 January 2018

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Cloning and characterization of miRNAs and their targets, including a novel miRNA-targeted NBS-LRR protein class gene in apple (Golden Delicious).

21 January 2018

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MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes

21 January 2018

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MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs

21 January 2018

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A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco

21 January 2018

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Auxin-induced, SCF(TIR1)-mediated poly-ubiquitination marks AUX/IAA proteins for degradation.

21 January 2018

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miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth.

21 January 2018

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21 January 2018

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Identification of microRNA processing determinants by random mutagenesis of Arabidopsis MIR172a precursor.

21 January 2018

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Repression of flowering by the miR172 target SMZ.

21 January 2018

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Insilico profiling of microRNAs in Korean ginseng (Panax ginseng Meyer).

21 January 2018

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Identification of microRNAs and their targets in switchgrass, a model biofuel plant species

21 January 2018

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Development-associated microRNAs in grains of wheat (Triticum aestivum L.).

21 January 2018

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MicroRNA-mediated signaling involved in plant root development

21 January 2018

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MicroPC (microPC): A comprehensive resource for predicting and comparing plant microRNAs

21 January 2018

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miRTour: Plant miRNA and target prediction tool

21 January 2018

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AP2/ERF family transcription factors in plant abiotic stress responses

21 January 2018

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Floral patterning defects induced by Arabidopsis APETALA2 and microRNA172 expression in Nicotiana benthamiana

21 January 2018

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Shoot Na+ exclusion and increased salinity tolerance engineered by cell type-specific alteration of Na+ transport in Arabidopsis.

21 January 2018

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Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

21 January 2018

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miR319a targeting of TCP4 is critical for petal growth and development in Arabidopsis

21 January 2018

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NAC transcription factors in plant abiotic stress responses

21 January 2018

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Suppression of the microRNA pathway by bacterial effector proteins

21 January 2018

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Overexpression of gma-MIR394a confers tolerance to drought in transgenic Arabidopsis thaliana

21 January 2018

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The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis

21 January 2018

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Origins and evolution of microRNA genes in Drosophila species

21 January 2018

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Origins and evolution of microRNA genes in plant species

21 January 2018

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The use of metabolomics to dissect plant responses to abiotic stresses

21 January 2018

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Regulation of LANCEOLATE by miR319 is required for compound-leaf development in tomato

21 January 2018

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Hidden branches: developments in root system architecture

21 January 2018

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Gene silencing in plants using artificial microRNAs and other small RNAs

21 January 2018

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Control of leaf morphogenesis by microRNAs

21 January 2018

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In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA.

21 January 2018

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CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana

21 January 2018

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Nuclear processing and export of microRNAs in Arabidopsis.

21 January 2018

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Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis

21 January 2018

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Genome-wide analysis of 24-nt siRNAs dynamic variations during rice superior and inferior grain filling

21 January 2018

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Characterization and expression patterns of microRNAs involved in rice grain filling

21 January 2018

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Identification of novel small RNAs in tomato (Solanum lycopersicum).

21 January 2018

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Site-directed nucleases: a paradigm shift in predictable, knowledge-based plant breeding.

21 January 2018

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NAC proteins: regulation and role in stress tolerance.

21 January 2018

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Computational identification of microRNAs and their targets in Gossypium hirsutum expressed sequence tags

21 January 2018

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Artificial microRNA-mediated virus resistance in plants

21 January 2018

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21 January 2018

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Prediction of plant microRNA targets

21 January 2018

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Biogenesis, turnover, and mode of action of plant microRNAs

21 January 2018

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Global alteration of microRNAs and transposon-derived small RNAs in cotton (Gossypium hirsutum) during Cotton leafroll dwarf polerovirus (CLRDV) infection

21 January 2018

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miRNAkey: a software for microRNA deep sequencing analysis

21 January 2018

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Auxin: a master regulator in plant root development.

21 January 2018

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Cucumis melo microRNA expression profile during aphid herbivory in a resistant and susceptible interaction

21 January 2018

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Highly specific gene silencing by artificial microRNAs in Arabidopsis.

21 January 2018

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Specific Effects of MicroRNAs on the Plant Transcriptome

21 January 2018

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A microRNA superfamily regulates nucleotide binding site-leucine-rich repeats and other mRNAs.

21 January 2018

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Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness.

21 January 2018

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Arabidopsis, the Rosetta stone of flowering time?

21 January 2018

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Transcription factors in plant defense and stress responses

21 January 2018

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Identification and characterization of 27 conserved microRNAs in citrus.

21 January 2018

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miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner

21 January 2018

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PMTED: a plant microRNA target expression database

21 January 2018

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Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis

21 January 2018

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Functions of microRNAs in plant stress responses

21 January 2018

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ROS and redox signalling in the response of plants to abiotic stress

21 January 2018

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miRNEST database: an integrative approach in microRNA search and annotation

21 January 2018

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CUP-SHAPED COTYLEDON1 transcription factor activates the expression of LSH4 and LSH3, two members of the ALOG gene family, in shoot organ boundary cells

21 January 2018

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A biochemical framework for RNA silencing in plants

21 January 2018

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Stepwise understanding of root development

21 January 2018

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miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana

21 January 2018

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Identification of conserved microRNAs and their targets in Chinese cabbage (Brassica rapa subsp. pekinensis).

21 January 2018

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Transcriptome-wide analysis of dynamic variations in regulation modes of grapevine microRNAs on their target genes during grapevine development.

21 January 2018

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Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana

21 January 2018

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TamiR159 directed wheat TaGAMYB cleavage and its involvement in anther development and heat response

21 January 2018

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Plant responses to drought, salinity and extreme temperatures: towards genetic engineering for stress tolerance

21 January 2018

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Response of miRNAs and their targets to salt and drought stresses in cotton (Gossypium hirsutum L.).

21 January 2018

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New human and mouse microRNA genes found by homology search

21 January 2018

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Structure determinants for accurate processing of miR172a in Arabidopsis thaliana.

21 January 2018

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Integration of spatial and temporal information during floral induction in Arabidopsis

21 January 2018

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Regulation of Arabidopsis shoot apical meristem and lateral organ formation by microRNA miR166g and its AtHD-ZIP target genes

21 January 2018

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On reconciling the interactions between APETALA2, miR172 and AGAMOUS with the ABC model of flower development

21 January 2018

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The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis

21 January 2018

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Arabidopsis microRNA167 controls patterns of ARF6 and ARF8 expression, and regulates both female and male reproduction.

21 January 2018

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Expression of Arabidopsis MIRNA genes

21 January 2018

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DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana

21 January 2018

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Identification and characterization of microRNAs and their targets in the bioenergy plant switchgrass (Panicum virgatum).

21 January 2018

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Identification, characterization and expression analysis of MicroRNAs and their targets in the potato (Solanum tuberosum)

21 January 2018

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Computational identification of novel microRNAs and targets in Brassica napus

21 January 2018

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Genetic and functional diversification of small RNA pathways in plants

21 January 2018

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Gradual increase of miR156 regulates temporal expression changes of numerous genes during leaf development in rice.

21 January 2018

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High-throughput deep sequencing shows that microRNAs play important roles in switchgrass responses to drought and salinity stress.

21 January 2018

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miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs

21 January 2018

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The roles of peptide hormones during plant root development

21 January 2018

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The microRNA-regulated SBP-Box transcription factor SPL3 is a direct upstream activator of LEAFY, FRUITFULL, and APETALA1.

21 January 2018

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Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.).

21 January 2018

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Orchestration of the floral transition and floral development in Arabidopsis by the bifunctional transcription factor APETALA2.

21 January 2018

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Identification and expression analysis of microRNAs at the grain filling stage in rice(Oryza sativa L.)via deep sequencing

21 January 2018

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Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity.

21 January 2018

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Identification and characterization of conserved microRNAs and their target genes in wheat (Triticum aestivum).

21 January 2018

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Auxin regulation of the microRNA390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development

21 January 2018

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Temporal control of trichome distribution by microRNA156-targeted SPL genes in Arabidopsis thaliana.

21 January 2018

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Methylation as a crucial step in plant microRNA biogenesis

21 January 2018

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Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells

21 January 2018

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Computational identification of 48 potato microRNAs and their targets

21 January 2018

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Conservation and divergence of plant microRNA genes.

21 January 2018

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Plant microRNA: a small regulatory molecule with big impact

21 January 2018

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Identification of soybean microRNAs and their targets

21 January 2018

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Identification and characterization of new plant microRNAs using EST analysis.

21 January 2018

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Computational identification of microRNAs and their targets.

21 January 2018

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PMRD: plant microRNA database

21 January 2018

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Computational identification of microRNAs in peach expressed sequence tags and validation of their precise sequences by miR-RACE.

21 January 2018

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Over-expression of microRNA169 confers enhanced drought tolerance to tomato

21 January 2018

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Over-expression of sly-miR156a in tomato results in multiple vegetative and reproductive trait alterations and partial phenocopy of the sft mutant

21 January 2018

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Identification of drought-induced microRNAs in rice

21 January 2018

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Constitutive expression of a miR319 gene alters plant development and enhances salt and drought tolerance in transgenic creeping bentgrass.

21 January 2018

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21 January 2018

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Regulation of flowering time and floral patterning by miR172

21 January 2018

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A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains

21 January 2018

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Over-expression of miR172 causes loss of spikelet determinacy and floral organ abnormalities in rice (Oryza sativa).

21 January 2018

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A Plant miRNA Contributes to Antibacterial Resistance by Repressing Auxin Signaling

21 January 2018

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Overexpression of miR160 affects root growth and nitrogen-fixing nodule number in Medicago truncatula

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/JCP.24685

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31 August 2017

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