Side-chain conformational entropy at protein-protein interfaces. (Q38270623)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12441384%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

title

Side-chain conformational entropy at protein-protein interfaces (English)

1 reference

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15 December 2019

1

1 reference

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15 December 2019

Jim Warwicker

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12441384%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

author name string

Christian Cole

series ordinal

1

1 reference

1 September 2017

Jim Warwicker

series ordinal

2

1 reference

1 September 2017

1 December 2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12441384%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

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15 December 2019

volume

11

1 reference

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15 December 2019

issue

12

1 reference

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15 December 2019

page(s)

2860-2870

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Noninvasive imaging of protein-protein interactions in living animals

15 December 2019

cites work

1 reference

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Noninvasive quantitative imaging of protein-protein interactions in living subjects

6 September 2017

1 reference

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Prediction of protein-protein interactions by docking methods.

6 September 2017

1 reference

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Exploring the protein interactome using comprehensive two-hybrid projects

6 September 2017

1 reference

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Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Identification of protein oligomerization states by analysis of interface conservation

6 September 2017

1 reference

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Dynamical view of the positions of key side chains in protein-protein recognition

6 September 2017

1 reference

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Unprecedented proximal binding of nitric oxide to heme: implications for guanylate cyclase

6 September 2017

1 reference

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Specificity in protein-protein interactions: the structural basis for dual recognition in endonuclease colicin-immunity protein complexes

6 September 2017

1 reference

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Convergent solutions to binding at a protein-protein interface

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

6 September 2017

The Protein Data Bank

1 reference

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The atomic structure of protein-protein recognition sites

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Analysis of protein-protein interaction sites using surface patches

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Prediction of protein side chain conformations: a study on the influence of backbone accuracy on conformation stability in the rotamer space.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Entropy in protein folding and in protein-protein interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Side-chain conformational entropy in protein folding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Principles of protein-protein interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

High-resolution crystallographic analysis of a co-operative dimeric hemoglobin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Atomic structure of a cytochrome c' with an unusual ligand-controlled dimer dissociation at 1.8 A resolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Application of a self-consistent mean field theory to predict protein side-chains conformation and estimate their conformational entropy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Structure of ferricytochrome c' from Rhodospirillum molischianum at 1.67 A resolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Conservation of polar residues as hot spots at protein interfaces

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Calculation of the free energy of association for protein complexes

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Three-dimensional structure of cytochrome c' from two Alcaligenes species and the implications for four-helix bundle structures.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Conservation helps to identify biologically relevant crystal contacts

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Residue frequencies and pairing preferences at protein-protein interfaces.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Protein-protein interfaces: analysis of amino acid conservation in homodimers

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Discriminating between homodimeric and monomeric proteins in the crystalline state

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Protein docking using spherical polar Fourier correlations.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Identification of functional surfaces of the zinc binding domains of intracellular receptors

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Prediction of protein-protein interaction sites using patch analysis

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Protein-protein interactions in colicin E9 DNase-immunity protein complexes. 1. Diffusion-controlled association and femtomolar binding for the cognate complex.

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2373749

Side-chain conformational entropy in protein unfolded states

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12441384

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1110/PS.0222702

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12441384%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12441384%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

1 reference