Docking, scoring, and affinity prediction in CAPRI. (Q38312001)

2 September 2017

Docking, scoring, and affinity prediction in CAPRI. (English)

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2 September 2017

2

Shoshana J Wodak

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Marc F. Lensink

object named as

Marc F Lensink

series ordinal

1

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language of work or name

English

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publication date

17 October 2013

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2 September 2017

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2 September 2017

81

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2 September 2017

2082-2095

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2 September 2017

12

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The cell as a collection of protein machines: preparing the next generation of molecular biologists

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Proteome survey reveals modularity of the yeast cell machinery

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A protein complex network of Drosophila melanogaster

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A census of human soluble protein complexes

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Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins

21 January 2018

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Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae

21 January 2018

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Relating three-dimensional structures to protein networks provides evolutionary insights

21 January 2018

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Interrogating protein interaction networks through structural biology

21 January 2018

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GWIDD: a comprehensive resource for genome-wide structural modeling of protein-protein interactions

21 January 2018

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Trendspotting in the Protein Data Bank

21 January 2018

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Large macromolecular complexes in the Protein Data Bank: a status report

21 January 2018

1 reference

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ModBase, a database of annotated comparative protein structure models, and associated resources

21 January 2018

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Computational Design of Proteins Targeting the Conserved Stem Region of Influenza Hemagglutinin

21 January 2018

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Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing

21 January 2018

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Biochemistry. Integrative structural biology

21 January 2018

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Recent Progress and Future Directions in Protein-Protein Docking

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Convergence and combination of methods in protein-protein docking

21 January 2018

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Structural basis of macromolecular recognition

21 January 2018

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Assessment of blind predictions of protein-protein interactions: current status of docking methods.

21 January 2018

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https://api.crossref.org/works/10.1002%2FPROT.24428

Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24428

Docking and scoring protein interactions: CAPRI 2009.

21 January 2018

1 reference

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The targets of CAPRI Rounds 13-19.

21 January 2018

1 reference

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Mechanism of activation of methyltransferases involved in translation by the Trm112 'hub' protein

21 January 2018

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Structure of the ultra-high-affinity colicin E2 DNase--Im2 complex

21 January 2018

1 reference

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Structural consequences of effector protein complex formation in a diiron hydroxylase

21 January 2018

1 reference

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Selection of Specific Protein Binders for Pre-Defined Targets from an Optimized Library of Artificial Helicoidal Repeat Proteins (alphaRep)

21 January 2018

1 reference

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Structural basis of bacterial defense against g-type lysozyme-based innate immunity

21 January 2018

1 reference

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Crystal structure of RlmAI: implications for understanding the 23S rRNA G745/G748-methylation at the macrolide antibiotic-binding site.

21 January 2018

1 reference

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Templates are available to model nearly all complexes of structurally characterized proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24428

Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins (αRep) based on thermostable HEAT-like repeats

21 January 2018

1 reference

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Specificity in protein-protein interactions: the structural basis for dual recognition in endonuclease colicin-immunity protein complexes

21 January 2018

1 reference

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The structural and energetic basis for high selectivity in a high-affinity protein-protein interaction

21 January 2018

1 reference

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Protein-protein docking benchmark version 4.0.

21 January 2018

1 reference

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A structure-based benchmark for protein-protein binding affinity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24428

Community-wide assessment of protein-interface modeling suggests improvements to design methodology

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24428

High-resolution mapping of protein sequence-function relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24428

Sequencing technologies - the next generation

21 January 2018

1 reference

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Solvated docking: introducing water into the modelling of biomolecular complexes.

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1002/PROT.24428

1 reference

2 September 2017

1 reference

PubMed ID

24115211