HIV RNA dimerisation interference by antisense oligonucleotides targeted to the 5' UTR structural elements (Q38323324)

2 September 2017

HIV RNA dimerisation interference by antisense oligonucleotides targeted to the 5' UTR structural elements (English)

1 reference

2 September 2017

José A Reyes-Darias

1

1 reference

PubMed ID

22820401

2 September 2017

Francisco J Sánchez-Luque

series ordinal

2

1 reference

PubMed ID

22820401

2 September 2017

Alfredo Berzal-Herranz

series ordinal

3

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2 September 2017

20 July 2012

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2 September 2017

1 reference

2 September 2017

169

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2 September 2017

1

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2 September 2017

63-71

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A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon

2 September 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Production of acquired immunodeficiency syndrome-associated retrovirus in human and nonhuman cells transfected with an infectious molecular clone

7 January 2021

2 references

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

inferred from DOI database lookup

7 January 2021

based on heuristic

NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Stem-loop SL4 of the HIV-1 Ψ RNA packaging signal exhibits weak affinity for the nucleocapsid protein. structural studies and implications for genome recognition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Role of the trans-activation response element in dimerization of HIV-1 RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Comparative kinetic analysis of structural variants of the hairpin ribozyme reveals further potential to optimize its catalytic performance.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C oncornavirus RNA molecules

7 January 2021

1 reference

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In vitro evidence that the untranslated leader of the HIV-1 genome is an RNA checkpoint that regulates multiple functions through conformational changes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

RNA interactions in the 5' region of the HIV-1 genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Cis elements and trans-acting factors involved in the RNA dimerization of the human immunodeficiency virus HIV-1.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

HIV-1 reverse transcription: a brief overview focused on structure-function relationships among molecules involved in initiation of the reaction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Structure and stability of wild-type and mutant RNA internal loops from the SL-1 domain of the HIV-1 packaging signal

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Evidence that a kissing loop structure facilitates genomic RNA dimerisation in HIV-1.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Mapping of RNA accessible sites for antisense experiments with oligonucleotide libraries

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Potent antisense oligonucleotides to the human multidrug resistance-1 mRNA are rationally selected by mapping RNA-accessible sites with oligonucleotide libraries

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Ultrastructure of HIV-1 genomic RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Two alternating structures of the HIV-1 leader RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Structural polymorphism of the HIV-1 leader region explored by computational methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Specific inhibition of expression of a human collagen gene (COL1A1) with modified antisense oligonucleotides. The most effective target sites are clustered in double-stranded regions of the predicted secondary structure for the mRNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

A 19-nucleotide sequence upstream of the 5' major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

HIV-1 genome dimerization: formation kinetics and thermal stability of dimeric HIV-1Lai RNAs are not improved by the 1-232 and 296-790 regions flanking the kissing-loop domain

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Dimerization of human immunodeficiency virus type 1 RNA involves sequences located upstream of the splice donor site.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

A rapid in vitro method for obtaining RNA accessibility patterns for complementary DNA probes: correlation with an intracellular pattern and known RNA structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

A kissing complex together with a stable dimer is involved in the HIV-1Lai RNA dimerization process in vitro

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Dimerization of HIV-1Lai RNA at low ionic strength. An autocomplementary sequence in the 5' leader region is evidenced by an antisense oligonucleotide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Probing alternative foldings of the HIV-1 leader RNA by antisense oligonucleotide scanning arrays

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Dimerization of retroviral RNA genomes: an inseparable pair.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Minimal region sufficient for genome dimerization in the human immunodeficiency virus type 1 virion and its potential roles in the early stages of viral replication

7 January 2021

1 reference

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A proposal for a new HIV-1 DLS structural model

7 January 2021

1 reference

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Inhibition of HIV-1 replication and dimerization interference by dual inhibitory RNAs.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Impact of human immunodeficiency virus type 1 RNA dimerization on viral infectivity and of stem-loop B on RNA dimerization and reverse transcription and dissociation of dimerization from packaging

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Role of stem B, loop B, and nucleotides next to the primer binding site and the kissing-loop domain in human immunodeficiency virus type 1 replication and genomic-RNA dimerization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

NMR analysis of intra- and inter-molecular stems in the dimerization initiation site of the HIV-1 genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Destabilization of the TAR hairpin affects the structure and function of the HIV-1 leader RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

inferred from DOI database lookup

7 January 2021

based on heuristic

Maturation of dimeric viral RNA of Moloney murine leukemia virus.

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIRUSRES.2012.07.004

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/J.VIRUSRES.2012.07.004

1 reference

2 September 2017

1 reference

PubMed ID

22820401