Global mapping of miRNA-target interactions in cattle (Bos taurus). (Q38429818)

3 September 2017

Global mapping of miRNA-target interactions in cattle (Bos taurus). (English)

1 reference

3 September 2017

0 references

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28811507%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Troels K Scheel

1

1 reference

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9 June 2020

7

Charles M Rice

1 reference

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9 June 2020

author name string

Michael J Moore

2

1 reference

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9 June 2020

Joseph M Luna

3

1 reference

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9 June 2020

Eiko Nishiuchi

4

1 reference

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9 June 2020

John Fak

5

1 reference

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9 June 2020

language of work or name

English

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publication date

15 August 2017

1 reference

3 September 2017

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9 June 2020

volume

7

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9 June 2020

page(s)

8190

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9 June 2020

issue

1

1 reference

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Creative Commons Attribution 4.0 International

9 June 2020

copyright license

start time

15 August 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1038/s41598-017-07880-8

0 references

cites work

Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data

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A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration

6 September 2017

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Functions of microRNA-33a/b and microRNA therapeutics

6 September 2017

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miRNA-target chimeras reveal miRNA 3'-end pairing as a major determinant of Argonaute target specificity

6 September 2017

1 reference

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Predicting effective microRNA target sites in mammalian mRNAs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

MDM4 regulation by the let-7 miRNA family in the DNA damage response of glioma cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Hepatitis C virus RNA functionally sequesters miR-122

6 September 2017

1 reference

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Role of microRNA-30c in lipid metabolism, adipogenesis, cardiac remodeling and cancer

6 September 2017

1 reference

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DICER-dependent biogenesis of let-7 miRNAs affects human cell response to DNA damage via targeting p21/p27.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Functional screen reveals essential roles of miR-27a/24 in differentiation of embryonic stem cells

6 September 2017

1 reference

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The Role of microRNAs in Bovine Infection and Immunity

6 September 2017

1 reference

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The biological functions of miRNAs: lessons from in vivo studies

6 September 2017

1 reference

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HTSeq--a Python framework to work with high-throughput sequencing data

6 September 2017

1 reference

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Argonaute high-throughput sequencing of RNAs isolated by cross-linking immunoprecipitation reveals a snapshot of miRNA gene regulation in the mammalian retina

6 September 2017

1 reference

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Argonaute CLIP-Seq reveals miRNA targetome diversity across tissue types

6 September 2017

1 reference

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Function and regulation of let-7 family microRNAs

6 September 2017

1 reference

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Identification and consequences of miRNA-target interactions--beyond repression of gene expression

6 September 2017

1 reference

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Development of microRNA therapeutics is coming of age.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Unambiguous identification of miRNA:target site interactions by different types of ligation reactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

The multilayered complexity of ceRNA crosstalk and competition

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

miRNA sponges: soaking up miRNAs for regulation of gene expression.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

miRBase: annotating high confidence microRNAs using deep sequencing data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

The miR-17/92 cluster: a comprehensive update on its genomics, genetics, functions and increasingly important and numerous roles in health and disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

The DNA-damage response to γ-radiation is affected by miR-27a in A549 cells.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Software for computing and annotating genomic ranges

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

The mechanics of miRNA-mediated gene silencing: a look under the hood of miRISC.

6 September 2017

1 reference

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A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Cooperative and individualistic functions of the microRNAs in the miR-23a~27a~24-2 cluster and its implication in human diseases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

MicroRNAs: target recognition and regulatory functions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

The let-7 family of microRNAs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

miRiad roles for the miR-17-92 cluster in development and disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

A mammalian microRNA expression atlas based on small RNA library sequencing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

RNAhybrid: microRNA target prediction easy, fast and flexible

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5557892

10.1038/S41598-017-07880-8

6 September 2017

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28811507%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

9 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28811507%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

1 reference