Transcription of tandemly repetitive DNA: functional roles (Q38592335)

4 September 2017

title

Transcription of tandemly repetitive DNA: functional roles (English)

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4 September 2017

author name string

Maria Assunta Biscotti

1

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4 September 2017

Adriana Canapa

2

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4 September 2017

Mariko Forconi

3

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4 September 2017

Ettore Olmo

4

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4 September 2017

Marco Barucca

5

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4 September 2017

publication date

25 September 2015

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4 September 2017

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4 September 2017

volume

23

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4 September 2017

issue

3

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4 September 2017

page(s)

463-477

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RNAPol-ChIP analysis of transcription from FSHD-linked tandem repeats and satellite DNA.

4 September 2017

cites work

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https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.

21 January 2018

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Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends

21 January 2018

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Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity.

21 January 2018

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Epigenetic engineering: histone H3K9 acetylation is compatible with kinetochore structure and function

21 January 2018

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Conserved organization of centromeric chromatin in flies and humans

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Accumulation of small murine minor satellite transcripts leads to impaired centromeric architecture and function

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Species-specific shifts in centromere sequence composition are coincident with breakpoint reuse in karyotypically divergent lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A satellite DNA containing CENP-B box-like motifs is present in the antarctic scallop Adamussium colbecki

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The library model for satellite DNA evolution: a case study with the rodents of the genus Ctenomys (Octodontidae) from the Iberá marsh, Argentina.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Polymerase chain reaction amplification of the Bag320 satellite family reveals the ancestral library and past gene conversion events in Bacillus rossius (Insecta Phasmatodea).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Active transcription and essential role of RNA polymerase II at the centromere during mitosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

RNA recognition motif 2 directs the recruitment of SF2/ASF to nuclear stress bodies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Factors that promote H3 chromatin integrity during transcription prevent promiscuous deposition of CENP-A(Cnp1) in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Telomeric noncoding RNA: telomeric repeat-containing RNA in telomere biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Telomeric noncoding RNA TERRA is induced by telomere shortening to nucleate telomerase molecules at short telomeres.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

ATRX contributes to epigenetic asymmetry and silencing of major satellite transcripts in the maternal genome of the mouse embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Human chromosomes 9, 12, and 15 contain the nucleation sites of stress-induced nuclear bodies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Analysis of small RNA in fission yeast; centromeric siRNAs are potentially generated through a structured RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

ICF, an immunodeficiency syndrome: DNA methyltransferase 3B involvement, chromosome anomalies, and gene dysregulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Mammalian satellite DNA: a speaking dumb.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Human chromosome 1 satellite 3 DNA is decondensed, demethylated and transcribed in senescent cells and in A431 epithelial carcinoma cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The secret message of heterochromatin: new insights into the mechanisms and function of centromeric and pericentric repeat sequence transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A transcriptomic analysis of human centromeric and pericentric sequences in normal and tumor cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Satellite DNA Modulates Gene Expression in the Beetle Tribolium castaneum after Heat Stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Satellite non-coding RNAs: the emerging players in cells, cellular pathways and cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Non-coding murine centromeric transcripts associate with and potentiate Aurora B kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

TERRA and hnRNPA1 orchestrate an RPA-to-POT1 switch on telomeric single-stranded DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

KDM2A represses transcription of centromeric satellite repeats and maintains the heterochromatic state

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Dicer is essential for formation of the heterochromatin structure in vertebrate cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Small silencing RNAs: an expanding universe

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Pericentric and centromeric transcription: a perfect balance required

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Centromeric chromatin: what makes it unique?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The centromere paradox: stable inheritance with rapidly evolving DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

RNA-mediated epigenetic regulation of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

WDHD1 modulates the post-transcriptional step of the centromeric silencing pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Involvement of satellite I noncoding RNA in regulation of chromosome segregation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

siRNA-mediated heterochromatin establishment requires HP1 and is associated with antisense transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

In vivo binding of active heat shock transcription factor 1 to human chromosome 9 heterochromatin during stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Stress-induced transcription of satellite III repeats.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The Paf1 complex represses small-RNA-mediated epigenetic gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The role of RNA interference in heterochromatic silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Comparative study of satellite DNA in ants of the Messor genus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Involvement of telomerase reverse transcriptase in heterochromatin maintenance

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The diverse functions of histone lysine methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Evolution of satellite DNAs from the genus Palorus--experimental evidence for the "library" hypothesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Interplay of selective pressure and stochastic events directs evolution of the MEL172 satellite DNA library in root-knot nematodes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Conserved DNA Motifs, Including the CENP-B Box-like, Are Possible Promoters of Satellite DNA Array Rearrangements in Nematodes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A small RNA response at DNA ends in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Preservation and high sequence conservation of satellite DNAs suggest functional constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The centromeric retrotransposons of rice are transcribed and differentially processed by RNA interference

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

ATRX tolerates activity-dependent histone H3 methyl/phos switching to maintain repetitive element silencing in neurons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Endogenous transcription at the centromere facilitates centromere activity in budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

CENP-H-containing complex facilitates centromere deposition of CENP-A in cooperation with FACT and CHD1

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

21 January 2018

The case for junk DNA

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Role of non-coding RNA and heterochromatin in aneuploidy and cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Satellite DNA-associated siRNAs as mediators of heat shock response in insects

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Satellite DNA-mediated effects on genome regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The THO complex component Thp2 counteracts telomeric R-loops and telomere shortening

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Satellite DNAs between selfishness and functionality: structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

21 January 2018

Satellite DNA evolution

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Molecular dissection of telomeric repeat-containing RNA biogenesis unveils the presence of distinct and multiple regulatory pathways.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Functional characterization of the TERRA transcriptome at damaged telomeres.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The chromatin remodelling complex NoRC safeguards genome stability by heterochromatin formation at telomeres and centromeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A strand-specific burst in transcription of pericentric satellites is required for chromocenter formation and early mouse development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Hutchinson-Gilford progeria syndrome through the lens of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A long non-coding RNA is required for targeting centromeric protein A to the human centromere.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Repetitive centromeric satellite RNA is essential for kinetochore formation and cell division

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Transcription within a functional human centromere

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Constitutive heterochromatin formation and transcription in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Developmentally regulated transcription of mammalian telomeres by DNA-dependent RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A 'higher order' of telomere regulation: telomere heterochromatin and telomeric RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Why repetitive DNA is essential to genome function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Recurrent amplifications and deletions of satellite DNA accompanied chromosomal diversification in South American tuco-tucos (genus Ctenomys, Rodentia: Octodontidae): a phylogenetic approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Cell cycle-dependent accumulation of histone H3.3 and euchromatic histone modifications in pericentromeric heterochromatin in response to a decrease in DNA methylation levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Aberrant overexpression of satellite repeats in pancreatic and other epithelial cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Stress-induced activation of heterochromatic transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Functional elements residing within satellite DNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Transcription of Satellite III non-coding RNAs is a general stress response in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

RNAi-mediated targeting of heterochromatin by the RITS complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Long-time evolution and highly dynamic satellite DNA in leptodactylid and hylodid frogs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Role of TERRA in the regulation of telomere length

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A role for small RNAs in DNA double-strand break repair.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Centromere RNA is a key component for the assembly of nucleoproteins at the nucleolus and centromere

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Mechanism of siRNA production from repetitive DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

BRCA1 tumour suppression occurs via heterochromatin-mediated silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

A key role for stress-induced satellite III transcripts in the relocalization of splicing factors into nuclear stress granules

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

Redundant Mechanisms to Form Silent Chromatin at Pericentromeric Regions Rely on BEND3 and DNA Methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9494-4

So much "junk" DNA in our genome

21 January 2018

1 reference

12 December 2020

Telomeres: protecting chromosomes against genome instability

1 reference

12 December 2020

An embryonic-like methylation pattern of classical satellite DNA is observed in ICF syndrome

1 reference

12 December 2020

Shining a light on the genome's 'dark matter'

1 reference

12 December 2020

A novel satellite DNA isolated in Pecten jacobaeus shows high sequence similarity among molluscs

1 reference

12 December 2020

Origin and evolution of Mytilus mussel satellite DNAs

1 reference

12 December 2020

The past, present, and future of human centromere genomics

1 reference

12 December 2020

DNA hypomethylation and human diseases.

1 reference

12 December 2020

Nucleotide sequences of HS-α satellite DNA from kangaroo rat dipodomys ordii and characterization of similar sequences in other rodents

1 reference

12 December 2020

The heterochromatin protein 1 (HP1) family: put away a bias toward HP1.

1 reference

12 December 2020

10.1007/S10577-015-9494-4

Identifiers

DOI

1 reference

4 September 2017

1 reference