Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity. (Q38957822)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21908635%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity (English)

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12 February 2020

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1 reference

4

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12 February 2020

author name string

A P White

1

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12 February 2020

K A Sibley

2

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12 February 2020

C D Sibley

3

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12 February 2020

R Schaefer

5

1 reference

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12 February 2020

M G Surette

6

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12 February 2020

T A Edge

7

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12 February 2020

N F Neumann

8

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12 February 2020

language of work or name

English

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publication date

9 September 2011

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Applied and Environmental Microbiology

12 February 2020

published in

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12 February 2020

volume

77

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12 February 2020

issue

21

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12 February 2020

page(s)

7620-7632

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Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species

12 February 2020

cites work

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Sex and virulence in Escherichia coli: an evolutionary perspective

9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress responses

9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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9 September 2017

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Promoter and regulon analysis of nitrogen assimilation factor, sigma54, reveal alternative strategy for E. coli MG1655 flagellar biosynthesis

9 September 2017

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Mutations in the csgD promoter associated with variations in curli expression in certain strains of Escherichia coli O157:H7.

9 September 2017

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9 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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14 September 2017

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Thin aggregative fimbriae from diarrheagenic Escherichia coli

14 September 2017

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Comparative genetics of the rdar morphotype in Salmonella

14 September 2017

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Biofilm formation-gene expression relay system in Escherichia coli: modulation of sigmaS-dependent gene expression by the CsgD regulatory protein via sigmaS protein stabilization

25 September 2017

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Comparative genomic hybridization and physiological characterization of environmental isolates indicate that significant (eco-)physiological properties are highly conserved in the species Escherichia coli.

17 June 2018

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Crl activates transcription initiation of RpoS-regulated genes involved in the multicellular behavior of Salmonella enterica serovar Typhimurium

17 June 2018

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Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity

17 June 2018

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Identification of the bases in the ompF regulatory region, which interact with the transcription factor OmpR.

17 June 2018

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17 June 2018

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Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method.

21 August 2018

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Evolutionary loss of the rdar morphotype in Salmonella as a result of high mutation rates during laboratory passage.

21 August 2018

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Evidence for a human-specific Escherichia coli clone.

21 August 2018

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Extraintestinal virulence is a coincidental by-product of commensalism in B2 phylogenetic group Escherichia coli strains.

21 August 2018

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Identification of forces shaping the commensal Escherichia coli genetic structure by comparing animal and human isolates.

21 August 2018

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Experimental mouse lethality of Escherichia coli isolates, in relation to accessory traits, phylogenetic group, and ecological source.

21 August 2018

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A CsgD-independent pathway for cellulose production and biofilm formation in Escherichia coli

21 August 2018

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Expression of cellulose and curli fimbriae by Escherichia coli isolated from the gastrointestinal tract.

21 August 2018

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Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood

21 August 2018

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Single-nucleotide polymorphism phylotyping of Escherichia coli

21 August 2018

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Escherichia coli strains belonging to phylogenetic group B2 have superior capacity to persist in the intestinal microflora of infants.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

Coliform dynamics and the implications for source tracking.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli?

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

The curli biosynthesis regulator CsgD co-ordinates the expression of both positive and negative determinants for biofilm formation in Escherichia coli

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

A phosphorylation site mutant of OmpR reveals different binding conformations at ompF and ompC.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrix

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

Phylogenetic distribution of extraintestinal virulence-associated traits in Escherichia coli.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

Multicellular and aggregative behaviour of Salmonella typhimurium strains is controlled by mutations in the agfD promoter.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

Clonal divergence in Escherichia coli as a result of recombination, not mutation.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3209187

Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21908635

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The effects of nutrients on the survival of Escherichia coli in lake water

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21908635

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.05909-11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21908635%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21908635%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference