Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy (Q39008493)

8 September 2017

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title

Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy (English)

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8 September 2017

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6

Pieter C Dorrestein

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8 September 2017

2

Louis-Felix Nothias

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8 September 2017

1

Robert A Quinn

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8 September 2017

4

Michael Meehan

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8 September 2017

Oliver Vining

3

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PubMed ID

27842887

8 September 2017

Eduardo Esquenazi

series ordinal

5

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8 September 2017

11 November 2016

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Trends in Pharmacological Sciences

8 September 2017

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8 September 2017

38

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8 September 2017

2

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8 September 2017

143-154

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MetFrag relaunched: incorporating strategies beyond in silico fragmentation

8 September 2017

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https://opencitations.net/index/coci/api/v1/citations/10.1186/S13321-016-0115-9

COCI

reference URL

Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication.

5 October 2021

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30 November 2021

https://opencitations.net/index/coci/api/v1/citations/10.1021/ACS.ANALCHEM.5B04804

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

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30 November 2021

https://opencitations.net/index/coci/api/v1/citations/10.1038/NBT.3597

Fragmentation trees reloaded

1 reference

https://opencitations.net/index/coci/api/v1/citations/10.1186/S13321-016-0116-8

COCI

reference URL

Searching molecular structure databases with tandem mass spectra using CSI:FingerID.

3 January 2022

1 reference

4 April 2022

https://opencitations.net/index/coci/api/v1/citations/10.1073/PNAS.1509788112

Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1101/GR.1239303

MetaboAnalyst 3.0--making metabolomics more meaningful

1 reference

25 December 2022

https://opencitations.net/index/coci/api/v1/citations/10.1093/NAR/GKV380

Phenazine content in the cystic fibrosis respiratory tract negatively correlates with lung function and microbial complexity

1 reference

30 December 2023

https://opencitations.net/index/api/v1/citations/10.1165/RCMB.2012-0088OC

Updates in metabolomics tools and resources: 2014-2015.

2 references

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1002/ELPS.201500417

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Metabolomics of pulmonary exacerbations reveals the personalized nature of cystic fibrosis disease

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Mass spectral molecular networking of living microbial colonies

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Use of tandem mass spectrometry for multianalyte screening of dried blood specimens from newborns

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Spongosine production by a Vibrio harveyi strain associated with the sponge Tectitethya crypta.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Effect of visceral fat accumulation on uric acid metabolism in male obese subjects: visceral fat obesity is linked more closely to overproduction of uric acid than subcutaneous fat obesity.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Molecular networking as a dereplication strategy

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Molecular cartography of the human skin surface in 3D

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

XCMS Online: a web-based platform to process untargeted metabolomic data

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Navigating natural variation in herbivory-induced secondary metabolism in coyote tobacco populations using MS/MS structural analysis

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Reinvigorating natural product combinatorial biosynthesis with synthetic biology

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

From Sample to Multi-Omics Conclusions in under 48 Hours

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5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Clustering millions of tandem mass spectra

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Recent advances in applications of liquid chromatography-tandem mass spectrometry to the analysis of reactive drug metabolites

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

The cystic fibrosis airway microbiome

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Relationship between serum uric acid concentration and insulin resistance and metabolic syndrome.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Recent advances in sample preparation techniques to overcome difficulties encountered during quantitative analysis of small molecules from biofluids using LC-MS/MS.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Advances in structure elucidation of small molecules using mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Natural products: a continuing source of novel drug leads

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Challenges in mass spectrometry based targeted metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Antibody-drug conjugates: current status and future directions

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Symplostatin 3, a new dolastatin 10 analogue from the marine cyanobacterium Symploca sp. VP452

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Cytochrome P450s and other enzymes in drug metabolism and toxicity

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra

2 references

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKU436

Quantitative Analysis of Urine Vapor and Breath by Gas-Liquid Partition Chromatography

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

MS/MS-based networking and peptidogenomics guided genome mining revealed the stenothricin gene cluster in Streptomyces roseosporus

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Bioinformatics: the next frontier of metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Liquid chromatography-mass spectrometry in in vitro drug metabolite screening.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Interkingdom metabolic transformations captured by microbial imaging mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Symplostatin 1: A dolastatin 10 analogue from the marine cyanobacterium Symploca hydnoides

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

The microbial pharmacists within us: a metagenomic view of xenobiotic metabolism

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Structure and Inhibition of Microbiome β-Glucuronidases Essential to the Alleviation of Cancer Drug Toxicity

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Semi-synthetic artemisinin: a model for the use of synthetic biology in pharmaceutical development.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Mapping the Trimethoprim-Induced Secondary Metabolome of Burkholderia thailandensis.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Analytical strategies for identifying drug metabolites

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Clinical drug-drug interaction assessment of ivacaftor as a potential inhibitor of cytochrome P450 and P-glycoprotein.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Basic local alignment search tool

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Malevamide D: isolation and structure determination of an isodolastatin H analogue from the marine cyanobacterium Symploca hydnoides

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Relationship between resistance to insulin-mediated glucose uptake, urinary uric acid clearance, and plasma uric acid concentration.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Vitroprocines, new antibiotics against Acinetobacter baumannii, discovered from marine Vibrio sp. QWI-06 using mass-spectrometry-based metabolomics approach

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Intraoperative tissue identification using rapid evaporative ionization mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

A massively spectacular view of the chemical lives of microbes.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

The re-emergence of natural products for drug discovery in the genomics era.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Analytical methods in untargeted metabolomics: state of the art in 2015.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Illuminating the dark matter in metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Liquid chromatography/atmospheric pressure ionization-mass spectrometry in drug metabolism studies.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

MS/MS networking guided analysis of molecule and gene cluster families.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

MALDI-TOF mass spectrometry: an emerging technology for microbial identification and diagnosis

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

The spectral networks paradigm in high throughput mass spectrometry

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

A new initiative on precision medicine

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Quorum-sensing signals indicate that cystic fibrosis lungs are infected with bacterial biofilms

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Mass spectral similarity for untargeted metabolomics data analysis of complex mixtures.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Identification of specific metabolites in culture supernatant of Mycobacterium tuberculosis using metabolomics: exploration of potential biomarkers.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Metabolomics-Based Discovery of Small Molecule Biomarkers in Serum Associated with Dengue Virus Infections and Disease Outcomes

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Secondary Metabolic Pathway-Targeted Metabolomics

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

The colibactin warhead crosslinks DNA.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Improved batch correction in untargeted MS-based metabolomics.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Current trends and challenges in sample preparation for global metabolomics using liquid chromatography-mass spectrometry.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

The isolation and structure of a remarkable marine animal antineoplastic constituent: dolastatin 10

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIPS.2016.10.011

Identifiers

DOI

10.1016/J.TIPS.2016.10.011

1 reference

8 September 2017

1 reference

PubMed ID

27842887