Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication. (Q39993461)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

title

Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

Jonathan Bisson

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

Jean-Luc Wolfender

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

4

Katia Gindro

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

5

Laurence Marcourt

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

8

Marc Litaudon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

7

Fanny Roussi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

author name string

Tiphaine Péresse

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

Van Cuong Pham

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

language of work or name

English

0 references

publication date

1 March 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

volume

88

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

page(s)

3317-3323

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

Mass spectral molecular networking of living microbial colonies

8 March 2020

cites work

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Vedelianin, a hexahydroxanthene derivative isolated from Macaranga vedeliana

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Aspewentins A-C, norditerpenes from a cryptic pathway in an algicolous strain of Aspergillus wentii.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Dereplication: racing to speed up the natural products discovery process.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

In silico enzymatic synthesis of a 400,000 compound biochemical database for nontargeted metabolomics

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

New kids on the block: novel informatics methods for natural product discovery

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Searching molecular structure databases with tandem mass spectra using CSI:FingerID.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Schweinfurthin A selectively inhibits proliferation and Rho signaling in glioma and neurofibromatosis type 1 tumor cells in a NF1-GRD-dependent manner.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Molecular networking as a dereplication strategy

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Cytotoxic geranyl stilbenes from Macaranga schweinfurthii.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

A new simple and high-yield synthesis of suberoylanilide hydroxamic acid and its inhibitory effect alone or in combination with retinoids on proliferation of human prostate cancer cells

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

MassBank: a public repository for sharing mass spectral data for life sciences

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Reappraising the structures and distribution of metabolites from black aspergilli containing uncommon 2-benzyl-4H-pyran-4-one and 2-benzylpyridin-4(1H)-one systems

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Schweinfurthin D, A Cytotoxic Stilbene fromMacaranga schweinfurthii

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Towards prediction of metabolic products of polyketide synthases: an in silico analysis

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Chemical epigenetics alters the secondary metabolite composition of guttate excreted by an atlantic-forest-soil-derived Penicillium citreonigrum

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Crowdsourcing natural products discovery to access uncharted dimensions of fungal metabolite diversity

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

RIKEN tandem mass spectral database (ReSpect) for phytochemicals: A plant-specific MS/MS-based data resource and database

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

A massively spectacular view of the chemical lives of microbes.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

In silico prediction and automatic LC-MS(n) annotation of green tea metabolites in urine

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

The re-emergence of natural products for drug discovery in the genomics era.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Studies on the Metabolites of Penicillium vulpinum

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Dereplication, sequencing and identification of peptidic natural products: from genome mining to peptidogenomics to spectral networks

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Metabolome consistency: additional parazoanthines from the mediterranean zoanthid parazoanthus axinellae

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Chemical induction of silent biosynthetic pathway transcription in Aspergillus niger.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Illuminating the dark matter in metabolomics

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

MyCompoundID MS/MS Search: Metabolite Identification Using a Library of Predicted Fragment-Ion-Spectra of 383,830 Possible Human Metabolites

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Suberoylanilide hydroxamic acid, a histone deacetylase inhibitor, induces the production of anti-inflammatory cyclodepsipeptides from Beauveria felina.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

The importance of mass spectrometric dereplication in fungal secondary metabolite analysis

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Use of natural products as chemical library for drug discovery and network pharmacology

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Current approaches and challenges for the metabolite profiling of complex natural extracts

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Combining Stable Isotope Labeling and Molecular Networking for Biosynthetic Pathway Characterization

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Advances in metabolite identification

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Spectral trees as a robust annotation tool in LC–MS based metabolomics

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

METLIN: a metabolite mass spectral database

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

LipidBlast in silico tandem mass spectrometry database for lipid identification

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Bioprospecting Portuguese Atlantic coast cyanobacteria for bioactive secondary metabolites reveals untapped chemodiversity

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Competitive fragmentation modeling of ESI-MS/MS spectra for putative metabolite identification

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Chlorinated polyketide obtained from a Daldinia sp. treated with the epigenetic modifier suberoylanilide hydroxamic acid

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Spectral library generating function for assessing spectrum-spectrum match significance

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.5B04804

Identifiers

DOI

10.1021/ACS.ANALCHEM.5B04804

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26882108%20AND%20SRC:MED&resulttype=core&format=json