Global subcellular characterization of protein degradation using quantitative proteomics. (Q39225646)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23242552%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

title

Global subcellular characterization of protein degradation using quantitative proteomics (English)

1 reference

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20 February 2020

5

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20 February 2020

Mark Larance

1

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20 February 2020

Tony Ly

4

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20 February 2020

author name string

Yasmeen Ahmad

2

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20 February 2020

Kathryn J Kirkwood

3

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20 February 2020

publication date

12 December 2012

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Molecular & Cellular Proteomics

20 February 2020

published in

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20 February 2020

volume

12

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20 February 2020

issue

3

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20 February 2020

page(s)

638-650

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GPS-ARM: computational analysis of the APC/C recognition motif by predicting D-boxes and KEN-boxes

20 February 2020

cites work

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10 September 2017

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Characterization of MRFAP1 turnover and interactions downstream of the NEDD8 pathway

10 September 2017

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10 September 2017

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10 September 2017

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10 September 2017

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Comparative proteomic analysis identifies a role for SUMO in protein quality control

10 September 2017

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Comparison between procedures using SDS for shotgun proteomic analyses of complex samples

10 September 2017

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10 September 2017

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10 September 2017

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Mitochondrial protein quality control during biogenesis and aging

10 September 2017

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Andromeda: a peptide search engine integrated into the MaxQuant environment

10 September 2017

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Proteome half-life dynamics in living human cells

10 September 2017

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Organelle proteomics experimental designs and analysis

10 September 2017

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The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

10 September 2017

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A computational screen for regulators of oxidative phosphorylation implicates SLIRP in mitochondrial RNA homeostasis

10 September 2017

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

10 September 2017

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

10 September 2017

1 reference

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FBW7 ubiquitin ligase: a tumour suppressor at the crossroads of cell division, growth and differentiation

10 September 2017

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The biological impact of mass-spectrometry-based proteomics

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591657

Analysis of nucleolar protein dynamics reveals the nuclear degradation of ribosomal proteins

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591657

Intracellular protein degradation: from a vague idea thru the lysosome and the ubiquitin-proteasome system and onto human diseases and drug targeting

10 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591657

Proteomic characterization of the human centrosome by protein correlation profiling

10 September 2017

1 reference

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Ratchets and clocks: the cell cycle, ubiquitylation and protein turnover

10 September 2017

1 reference

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Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

10 September 2017

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Gene-specific regulation by general translation factors

10 September 2017

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Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication

10 September 2017

1 reference

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Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

10 September 2017

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The KEN box: an APC recognition signal distinct from the D box targeted by Cdh1

10 September 2017

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10 September 2017

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The p53 tumour suppressor gene

10 September 2017

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Cyclin is degraded by the ubiquitin pathway

10 September 2017

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HSP90 and its R2TP/Prefoldin-like cochaperone are involved in the cytoplasmic assembly of RNA polymerase II

10 September 2017

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Global protein stability profiling in mammalian cells

14 September 2017

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Turnover of the human proteome: determination of protein intracellular stability by dynamic SILAC.

14 September 2017

1 reference

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Rapid degradation of a large fraction of newly synthesized proteins by proteasomes.

14 September 2017

1 reference

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Advancing cell biology through proteomics in space and time (PROSPECTS).

25 September 2017

1 reference

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Systematic analysis of protein pools, isoforms, and modifications affecting turnover and subcellular localization

17 June 2018

1 reference

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Jun turnover is controlled through JNK-dependent phosphorylation of the E3 ligase Itch

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591657

Determining protein half-lives

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591657

Regulation of p53 protein expression in human breast cancer cell lines

21 August 2018

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12 December 2020

Localization of organelle proteins by isotope tagging (LOPIT)

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12 December 2020

Proteolysis: from the lysosome to ubiquitin and the proteasome

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12 December 2020

Phosphorylation of the alpha-subunit of the eukaryotic initiation factor-2 (eIF2alpha) reduces protein synthesis and enhances apoptosis in response to proteasome inhibition

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12 December 2020

Identifiers

DOI

10.1074/MCP.M112.024547

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23242552%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23242552%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

1 reference