Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias. (Q39337607)

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27 February 2020

title

Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias (English)

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5

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author name string

Austen C Thomas

1

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Simon N Jarman

2

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Katherine H Haman

3

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Andrew W Trites

4

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publication date

24 October 2013

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volume

23

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issue

15

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page(s)

3706-3718

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Basic local alignment search tool

27 February 2020

cites work

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Proportion of prey consumed can be determined from faecal DNA using real-time PCR.

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High-throughput amplicon sequencing of rRNA genes requires a copy number correction to accurately reflect the effects of management practices on soil nematode community structure

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Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?

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Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?

21 January 2018

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Considerations for the development and application of control materials to improve metagenomic microbial community profiling

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High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples

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Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

21 January 2018

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Influence of management practices on large herbivore diet—Case of European bison in Białowieża Primeval Forest (Poland)

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Molecular assessment of heterotrophy and prey digestion in zooxanthellate cnidarians.

21 January 2018

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21 January 2018

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Who is eating what: diet assessment using next generation sequencing

21 January 2018

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A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

21 January 2018

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High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species

21 January 2018

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Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan

21 January 2018

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Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis.

21 January 2018

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Monitoring an alien invasion: DNA barcoding and the identification of lionfish and their prey on coral reefs of the Mexican Caribbean

21 January 2018

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Blocking primers to enhance PCR amplification of rare sequences in mixed samples - a case study on prey DNA in Antarctic krill stomachs

21 January 2018

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Synthetic spike-in standards improve run-specific systematic error analysis for DNA and RNA sequencing

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21 January 2018

Identifiers

DOI

10.1111/MEC.12523

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