The NMR structure of 31mer RNA domain of Escherichia coli RNase P RNA using its non-uniformly deuterium labelled counterpart [the 'NMR-window' concept] (Q39716448)

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scientific article published on June 1996

Language	Label	Description	Also known as
English	The NMR structure of 31mer RNA domain of Escherichia coli RNase P RNA using its non-uniformly deuterium labelled counterpart [the 'NMR-window' concept]	scientific article published on June 1996

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

The NMR structure of 31mer RNA domain of Escherichia coli RNase P RNA using its non-uniformly deuterium labelled counterpart [the 'NMR-window' concept] (English)

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

Escherichia coli

1 reference

based on heuristic

inferred from title

Jyoti Chattopadhyaya

object named as

Chattopadhyaya J

7

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Europe PubMed Central

PMC publication ID

14 September 2017

author name string

Glemarec C

1

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Europe PubMed Central

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14 September 2017

Kufel J

2

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

Földesi A

3

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

Maltseva T

4

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Europe PubMed Central

PMC publication ID

14 September 2017

Sandström A

5

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Europe PubMed Central

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14 September 2017

Kirsebom LA

6

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Europe PubMed Central

PMC publication ID

14 September 2017

language of work or name

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publication date

1 June 1996

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Europe PubMed Central

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14 September 2017

Nucleic Acids Research

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Europe PubMed Central

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14 September 2017

24

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Europe PubMed Central

PMC publication ID

14 September 2017

11

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

2022-2035

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

The use of non-uniform deuterium labelling ['NMR-window'] to study the NMR structure of a 21mer RNA hairpin

1 reference

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Direct estimation of base-pair exchange kinetics in oligo-DNA by a combination of NOESY and ROESY experiments

1 reference

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Solution structure of a conserved DNA sequence from the HIV-1 genome: restrained molecular dynamics simulation with distance and torsion angle restraints derived from two-dimensional NMR spectra

1 reference

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Divalent metal ion binding to a conserved wobble pair defining the upstream site of cleavage of group I self-splicing introns

1 reference

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Structure and dynamics of a DNA.RNA hybrid duplex with a chiral phosphorothioate moiety: NMR and molecular dynamics with conventional and time-averaged restraints

1 reference

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The 3'-terminal end (NCCA) of tRNA determines the structure and stability of the aminoacyl acceptor stem

1 reference

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Structure of the P1 Helix from Group I Self-splicing Introns

1 reference

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Solution structures of psoralen monoadducted and cross-linked DNA oligomers by NMR spectroscopy and restrained molecular dynamics

1 reference

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Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteins

1 reference

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The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

1 reference

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Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

1 reference

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Ribonucleases, tRNA nucleotidyltransferase, and the 3' processing of tRNA.

1 reference

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14 September 2017

RNA structure and NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

14 September 2017

Site-specific cleavage by metal ion cofactors and inhibitors of M1 RNA, the catalytic subunit of RNase P from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

14 September 2017

Solution structure of a DNA octamer containing the Pribnow box via restrained molecular dynamics simulation with distance and torsion angle constraints derived from two-dimensional nuclear magnetic resonance spectral fitting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

14 September 2017

Ribonuclease P RNA and protein subunits from bacteria

1 reference

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14 September 2017

NMR analysis of helix I from the 5S RNA of Escherichia coli

1 reference

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14 September 2017

Proton NMR studies of manganese ion binding to tRNA-derived acceptor arm duplexes

1 reference

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14 September 2017

Deuteriation of sugar protons simplify NMR assignments and structure determination of large oligonucleotide by the 1H-NMR window approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

14 September 2017

The differences in the T2 relaxation rates of the protons in the partially-deuteriated and fully protonated sugar residues in a large oligo-DNA ('NMR-window') gives complementary structural information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

14 September 2017

Lead-catalyzed cleavage of ribonuclease P RNA as a probe for integrity of tertiary structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

14 September 2017

RNase P--a 'Scarlet Pimpernel'.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

25 September 2017

Base pairing between Escherichia coli RNase P RNA and its substrate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145904

25 September 2017

Interproton distance bounds from 2D NOE intensities: effect of experimental noise and peak integration errors.

1 reference

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15 June 2018

Metropolis Monte Carlo calculations of DNA structure using internal coordinates and NMR distance restraints: an alternative method for generating a high-resolution solution structure.

1 reference

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15 June 2018

Synthesis and purification of large amounts of RNA oligonucleotides.

1 reference

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15 June 2018

Long-Range Structure in Ribonuclease P RNA

1 reference

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Structure of an unusually stable RNA hairpin

1 reference

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15 June 2018

Lead-ion-induced cleavage of RNase P RNA.

1 reference

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Nucleosides. LXXIX. Facile base-catalyzed hydrogen isotope labeling at position 6 of pyrimidine nucleosides

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A new route to nucleoside 5'-triphosphates

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https://pubmed.ncbi.nlm.nih.gov/8668532

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Systematic application of high-resolution, phase-sensitive two-dimensional 1H-NMR techniques for the identification of the amino-acid-proton spin systems in proteins. Rabbit metallothionein-2

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Pyridyl groups for protection of the imide functions of uridine and guanosine. Exploration of their displacement reactions for site-specific modifications of uracil and guanine bases

1 reference

https://pubmed.ncbi.nlm.nih.gov/8668532

12 December 2020

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NMR spectroscopic properties (1H at 500 MHz) of deuterated∗ ribonucleotide-dimers ApU∗, GpC∗, partially deuterated 2′-deoxyribonucleotide-dimers d(TpA∗, d(ApT∗, d(GpC∗ and their comparison with natural counterparts (1H-NMR window)

1 reference

https://pubmed.ncbi.nlm.nih.gov/8668532

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based on heuristic

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Cleavage site selection by M1 RNA the catalytic subunit of Escherichia coli RNase P, is influenced by pH

1 reference

https://pubmed.ncbi.nlm.nih.gov/8668532

12 December 2020

based on heuristic

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Identifiers

10.1093/NAR/24.11.2022

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 September 2017

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