IPO: a tool for automated optimization of XCMS parameters (Q39826779)

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5 March 2020

title

IPO: a tool for automated optimization of XCMS parameters (English)

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5 March 2020

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5

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5 March 2020

Christoph Magnes

11

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7

Steffen Neumann

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5 March 2020

author name string

Gunnar Libiseller

1

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5 March 2020

Michaela Dvorzak

2

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5 March 2020

Ulrike Kleb

3

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5 March 2020

Edgar Gander

4

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5 March 2020

Frank Madeo

6

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5 March 2020

Gert Trausinger

8

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Frank Sinner

9

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Thomas Pieber

10

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publication date

16 April 2015

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5 March 2020

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volume

16

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5 March 2020

page(s)

118

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Creative Commons Attribution 4.0 International

5 March 2020

copyright license

start time

16 April 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1186/s12859-015-0562-8

0 references

cites work

Time-saving design of experiment protocol for optimization of LC-MS data processing in metabolomic approaches.

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xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data

22 September 2017

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Strategy for optimizing LC-MS data processing in metabolomics: a design of experiments approach.

22 September 2017

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XCMS Online: a web-based platform to process untargeted metabolomic data

22 September 2017

1 reference

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CAMERA: an integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets

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A comprehensive method for lipid profiling by liquid chromatography-ion cyclotron resonance mass spectrometry

22 September 2017

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PeakML/mzMatch: a file format, Java library, R library, and tool-chain for mass spectrometry data analysis

22 September 2017

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Metabolomic analysis and visualization engine for LC-MS data

22 September 2017

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MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

22 September 2017

1 reference

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apLCMS--adaptive processing of high-resolution LC/MS data

22 September 2017

1 reference

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MetAlign: interface-driven, versatile metabolomics tool for hyphenated full-scan mass spectrometry data preprocessing

22 September 2017

1 reference

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Highly sensitive feature detection for high resolution LC/MS

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4404568

XCMS2: processing tandem mass spectrometry data for metabolite identification and structural characterization

22 September 2017

1 reference

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Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping.

22 September 2017

1 reference

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XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

22 September 2017

1 reference

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Processing methods for differential analysis of LC/MS profile data

22 September 2017

1 reference

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A novel stable isotope labelling assisted workflow for improved untargeted LC-HRMS based metabolomics research.

22 September 2017

1 reference

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MetExtract: a new software tool for the automated comprehensive extraction of metabolite-derived LC/MS signals in metabolomics research.

17 June 2018

1 reference

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SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling

17 June 2018

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Ultrahigh performance liquid chromatography-tandem mass spectrometry method for fast and robust quantification of anionic and aromatic metabolites

17 June 2018

1 reference

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Separation and quantitation of water soluble cellular metabolites by hydrophilic interaction chromatography-tandem mass spectrometry.

20 August 2018

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Some New Three Level Designs for the Study of Quantitative Variables

20 August 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1186/S12859-015-0562-8

Identifiers

DOI

10.1186/S12859-015-0562-8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25888443%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/LibisellerDKGEM15

5 March 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25888443%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

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