Accurate RNA consensus sequencing for high-fidelity detection of transcriptional mutagenesis-induced epimutations. (Q40086673)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28798064%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

title

Accurate RNA consensus sequencing for high-fidelity detection of transcriptional mutagenesis-induced epimutations (English)

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27 March 2020

1

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27 March 2020

author name string

Lawrence A Loeb

series ordinal

2

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27 March 2020

language of work or name

English

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publication date

10 August 2017

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27 March 2020

number of pages

6

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Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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27 March 2020

volume

114

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27 March 2020

issue

35

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27 March 2020

page(s)

9415-9420

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Conserved rates and patterns of transcription errors across bacterial growth states and lifestyles

27 March 2020

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Primer ID Validates Template Sampling Depth and Greatly Reduces the Error Rate of Next-Generation Sequencing of HIV-1 Genomic RNA Populations

17 June 2018

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17 June 2018

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Library preparation for highly accurate population sequencing of RNA viruses

17 June 2018

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Mutational and fitness landscapes of an RNA virus revealed through population sequencing

17 June 2018

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Large-scale detection of in vivo transcription errors

17 June 2018

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Direct assessment of transcription fidelity by high-resolution RNA sequencing

17 June 2018

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Heritable change caused by transient transcription errors

17 June 2018

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Transcriptional mutagenesis and its potential roles in the etiology of cancer and bacterial antibiotic resistance

17 June 2018

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Isolation and characterization of transcription fidelity mutants

17 June 2018

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Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems

17 June 2018

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Transcriptional mutagenesis: causes and involvement in tumour development

17 June 2018

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O6-methylguanine induces altered proteins at the level of transcription in human cells

17 June 2018

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Target-enrichment strategies for next-generation sequencing

17 June 2018

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Fast and accurate short read alignment with Burrows-Wheeler transform

17 June 2018

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Rpb9 subunit controls transcription fidelity by delaying NTP sequestration in RNA polymerase II.

17 June 2018

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Transcriptional infidelity promotes heritable phenotypic change in a bistable gene network

17 June 2018

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8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells

17 June 2018

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Transient reversal of RNA polymerase II active site closing controls fidelity of transcription elongation

17 June 2018

1 reference

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Knockdown of TFIIS by RNA silencing inhibits cancer cell proliferation and induces apoptosis

17 June 2018

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Arbovirus evolution in vivo is constrained by host alternation

17 June 2018

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Translesion synthesis of 7,8-dihydro-8-oxo-2'-deoxyguanosine by DNA polymerase eta in vivo

17 June 2018

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Transcription through 8-oxoguanine in DNA repair-proficient and Csb(-)/Ogg1(-) DNA repair-deficient mouse embryonic fibroblasts is dependent upon promoter strength and sequence context

17 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5584456

Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population

17 June 2018

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Endogenous DNA damage in humans: a review of quantitative data

17 June 2018

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The maintenance of the accuracy of protein synthesis and its relevance to ageing

17 June 2018

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Oxidative DNA damage: mechanisms, mutation, and disease

17 June 2018

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Translesion synthesis by RNA polymerases: occurrence and biological implications for transcriptional mutagenesis

17 June 2018

1 reference

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A one-step method for in vitro production of tRNA transcripts

17 June 2018

1 reference

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Frequency of replication/transcription errors in (A)/(T) runs of human genes

17 June 2018

1 reference

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Frameshift mutants of beta amyloid precursor protein and ubiquitin-B in Alzheimer's and Down patients

17 June 2018

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The maintenance of the accuracy of protein synthesis and its relevance to ageing: a correction

17 June 2018

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Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer

17 June 2018

1 reference

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Connections between translation, transcription and replication error-rates

17 June 2018

1 reference

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Fidelity of HIV-1 reverse transcriptase copying RNA in vitro

17 June 2018

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DNA Glycosylases, Endonucleases for Apurinic/Apyrimidinic Sites, and Base Excision-Repair

17 June 2018

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17 June 2018

1 reference

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Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli.

20 August 2018

1 reference

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Cancerous hyper-mutagenesis in p53 genes is possibly associated with transcriptional bypass of DNA lesions

20 August 2018

1 reference

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Mutations in RNA: a first example of molecular misreading in Alzheimer's disease

20 August 2018

1 reference

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12 December 2020

An RNA polymerase mutant with reduced accuracy of chain elongation

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12 December 2020

Highly mutagenic bypass synthesis by T7 RNA polymerase of site-specific benzo[a]pyrene diol epoxide-adducted template DNA

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12 December 2020

The frequency of transcriptional and translational errors at nonsense codons in the lacZ gene of Escherichia coli

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Formation of 8-hydroxyguanine residues in DNA by X-irradiation

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Transcriptional infidelity in aging cells and its relevance for the Orgel hypothesis

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Phenotypic change caused by transcriptional bypass of uracil in nondividing cells

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12 December 2020

Identifiers

DOI

10.1073/PNAS.1709166114

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28798064%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

0 references

1 reference

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27 March 2020

PubMed publication ID

28798064

1 reference