Non-sequence-specific interactions can account for the compaction of proteins unfolded under "native" conditions. (Q40093000)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19751743%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Non-sequence-specific interactions can account for the compaction of proteins unfolded under "native" conditions (English)

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7 February 2020

3

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7 February 2020

author name string

Jonathan E Kohn

series ordinal

1

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7 February 2020

Blake Gillespie

series ordinal

2

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7 February 2020

language of work or name

English

0 references

publication date

12 September 2009

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Journal of Molecular Biology

7 February 2020

published in

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7 February 2020

volume

394

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7 February 2020

issue

2

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7 February 2020

page(s)

343-350

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Theoretical and experimental demonstration of the importance of specific nonnative interactions in protein folding

7 February 2020

cites work

1 reference

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Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy

22 September 2017

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On the Structure of Native, Denatured, and Coagulated Proteins

22 September 2017

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Is there or isn't there? The case for (and against) residual structure in chemically denatured proteins

22 September 2017

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22 September 2017

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22 September 2017

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The effects of nonnative interactions on protein folding rates: theory and simulation

22 September 2017

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22 September 2017

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Aromatic and methyl NOEs highlight hydrophobic clustering in the unfolded state of an SH3 domain

22 September 2017

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Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins

22 September 2017

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The expanded denatured state: an ensemble of conformations trapped in a locally encoded topological space

22 September 2017

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Cooperative interactions and a non-native buried Trp in the unfolded state of an SH3 domain

22 September 2017

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Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques

22 September 2017

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Protein folding intermediates and pathways studied by hydrogen exchange

22 September 2017

1 reference

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Role of the molten globule state in protein folding.

22 September 2017

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Methods for exploring early events in protein folding

22 September 2017

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Compactness of the denatured state of a fast-folding protein measured by submillisecond small-angle x-ray scattering

22 September 2017

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The folding kinetics and thermodynamics of the Fyn-SH3 domain.

22 September 2017

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Ultrafast signals in protein folding and the polypeptide contracted state

22 September 2017

1 reference

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Submillisecond protein folding kinetics studied by ultrarapid mixing

22 September 2017

1 reference

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Structure and dynamics of a denatured 131-residue fragment of staphylococcal nuclease: a heteronuclear NMR study

22 September 2017

1 reference

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Characterization of the interaction of natural proline-rich peptides with five different SH3 domains.

22 September 2017

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Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249391

Truncated staphylococcal nuclease is compact but disordered

22 September 2017

1 reference

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Methionine oxidation of monomeric lambda repressor: the denatured state ensemble under nondenaturing conditions

22 September 2017

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Fluorescence energy transfer indicates similar transient and equilibrium intermediates in staphylococcal nuclease folding

15 June 2018

1 reference

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Hydrodynamic radii of native and denatured proteins measured by pulse field gradient NMR techniques.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3249391

Structural characterization of the molten globule of alpha-lactalbumin by solution X-ray scattering

15 June 2018

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Specifically collapsed intermediate in the early stage of the folding of ribonuclease A.

15 June 2018

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Early collapse is not an obligate step in protein folding

20 August 2018

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20 August 2018

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20 August 2018

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20 August 2018

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Conformational Pathway of the Polypeptide Chain of Chymotrypsin Inhibitor-2 Growing from its N Terminusin vitro. Parallels with the Protein Folding Pathway

20 August 2018

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Chain collapse can occur concomitantly with the rate-limiting step in protein folding

2 December 2018

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12 December 2020

Is burst hydrophobic collapse necessary for protein folding?

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12 December 2020

Acquisition of native-like interactions in C-terminal fragments of barnase

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12 December 2020

Proteins in 6-M guanidine hydrochloride. Demonstration of random coil behavior

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12 December 2020

Exploring the folding funnel of a polypeptide chain by biophysical studies on protein fragments

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12 December 2020

Kinetics of lysozyme refolding: structural characterization of a non-specifically collapsed state using time-resolved X-ray scattering

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12 December 2020

Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures

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12 December 2020

Characterization of soluble artificial proteins with random sequences

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12 December 2020

The Solubility of Amino Acids, Diglycine, and Triglycine in Aqueous Guanidine Hydrochloride Solutions

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12 December 2020

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Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19751743%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19751743%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

PubMed publication ID

19751743

1 reference