Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy (Q30478703)

14 October 2017

Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy (English)

1 reference

14 October 2017

0 references

synchrotron radiation

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5

Peter Baumgärtel

1 reference

14 October 2017

Armin Hoffmann

1

1 reference

14 October 2017

Avinash Kane

2

1 reference

14 October 2017

Daniel Nettels

3

1 reference

14 October 2017

David E Hertzog

4

1 reference

14 October 2017

Jan Lengefeld

6

1 reference

14 October 2017

Gerd Reichardt

7

1 reference

14 October 2017

David A Horsley

8

1 reference

14 October 2017

Robert Seckler

9

1 reference

14 October 2017

Olgica Bakajin

10

1 reference

14 October 2017

Benjamin Schuler

11

1 reference

14 October 2017

language of work or name

English

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publication date

21 December 2006

1 reference

Proceedings of the National Academy of Sciences of the United States of America

14 October 2017

1 reference

14 October 2017

104

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14 October 2017

1

1 reference

14 October 2017

105-110

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End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Coil-globule transition in the denatured state of a small protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

The inverted chevron plot measured by NMR relaxation reveals a native-like unfolding intermediate in acyl-CoA binding protein

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Statistical coil model of the unfolded state: resolving the reconciliation problem

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Is there or isn't there? The case for (and against) residual structure in chemically denatured proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Single-molecule fluorescence spectroscopy of protein folding.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Specific collapse followed by slow hydrogen-bond formation of beta-sheet in the folding of single-chain monellin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Polyproline and the "spectroscopic ruler" revisited with single-molecule fluorescence.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Femtomole mixer for microsecond kinetic studies of protein folding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Reassessing random-coil statistics in unfolded proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Random-coil behavior and the dimensions of chemically unfolded proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Unfolded proteins and protein folding studied by NMR.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Analysis of circular dichroism data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Polymer models of protein stability, folding, and interactions.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Native-like mean structure in the unfolded ensemble of small proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Synchrotron radiation circular dichroism spectroscopy of proteins: secondary structure, fold recognition and structural genomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Ratiometric single-molecule studies of freely diffusing biomolecules.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Solution NMR structure of the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Data registration and selective single-molecule analysis using multi-parameter fluorescence detection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

A surprising simplicity to protein folding.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Single-molecule protein folding: diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Hydrodynamic radii of native and denatured proteins measured by pulse field gradient NMR techniques.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

A simple model for calculating the kinetics of protein folding from three-dimensional structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

A continuous-flow capillary mixing method to monitor reactions on the microsecond time scale.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Denatured states of yeast phosphoglycerate kinase.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Structural analysis of non-native states of proteins by NMR methods

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

20 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

20 June 2018

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Simultaneous determination of intramolecular distance distributions and conformational dynamics by global analysis of energy transfer measurements

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

How do small single-domain proteins fold?

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Persistence of native-like topology in a denatured protein in 8 M urea

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Solution structure of a protein denatured state and folding intermediate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Rapid collapse precedes the fast two-state folding of the cold shock protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Single-molecule FRET study of denaturant induced unfolding of RNase H.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

The burst phase in ribonuclease A folding and solvent dependence of the unfolded state.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Fast collapse but slow formation of secondary structure elements in the refolding transition of E. coli adenylate kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Conservation of rapid two-state folding in mesophilic, thermophilic and hyperthermophilic cold shock proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Site-specific dimensions across a highly denatured protein; a single molecule study

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Direct demonstration of structural similarity between native and denatured eglin C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Role of the chain termini for the folding transition state of the cold shock protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Scaling behavior and structure of denatured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Are proteins made from a limited parts list?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Novel matrix descriptor for secondary structure segments in proteins: demonstration of predictability from circular dichroism spectra.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Estimation of the number of alpha-helical and beta-strand segments in proteins using circular dichroism spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Simulation of fluorescence anisotropy experiments: probing protein dynamics

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Development of the multiple sequence approximation within the AGADIR model of alpha-helix formation: comparison with Zimm-Bragg and Lifson-Roig formalisms.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765419

Single-Molecule Measurement of Protein Folding Kinetics

26 November 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0604353104

Specificity of the initial collapse in the folding of the cold shock protein

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17185422

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0604353104

1 reference

14 October 2017

0 references

1 reference

14 October 2017

1 reference