Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage λ and Escherichia coli (Q40718698)

23 September 2017

Population Dynamics of Phage and Bacteria in Spatially Structured Habitats Using Phage λ and Escherichia coli (English)

1 reference

23 September 2017

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1 reference

Escherichia coli

1 reference

Stanley Brown

2

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Namiko Mitarai

object named as

Namiko Mitarai

series ordinal

1

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Kim Sneppen

object named as

Kim Sneppen

series ordinal

3

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publication date

27 May 2016

1 reference

23 September 2017

Journal of Bacteriology

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23 September 2017

198

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23 September 2017

12

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23 September 2017

1783-1793

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Recombinant transfer in the basic genome of Escherichia coli.

23 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Well-temperate phage: optimal bet-hedging against local environmental collapses.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Phage and bacteria support mutual diversity in a narrowing staircase of coexistence.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Phenotypic resistance and the dynamics of bacterial escape from phage control

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Comparative genomics of defense systems in archaea and bacteria

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

A quorum-sensing-induced bacteriophage defense mechanism

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Coexistence of phage and bacteria on the boundary of self-organized refuges

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Effects of bacteriophage traits on plaque formation

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Single-virus tracking reveals a spatial receptor-dependent search mechanism.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

A forward-genetic screen and dynamic analysis of lambda phage host-dependencies reveals an extensive interaction network and a new anti-viral strategy

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Bacteriophage resistance mechanisms

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

25 September 2017

Why do phage play dice?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Determination of cell fate selection during phage lambda infection

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Collective decision making in bacterial viruses

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Marine viruses--major players in the global ecosystem

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

On kinetics of phage adsorption

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Phage lambda CIII: a protease inhibitor regulating the lysis-lysogeny decision

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Viruses' life history: towards a mechanistic basis of a trade-off between survival and reproduction among phages

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Functional alignment of regulatory networks: a study of temperate phages

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Switches in bacteriophage lambda development

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Phage regulatory circuits and virulence gene expression

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Coevolutionary arms races between bacteria and bacteriophage

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Here a virus, there a virus, everywhere the same virus?

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Quantitative kinetic analysis of the bacteriophage lambda genetic network

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Studies on the virulence of bacteriophage-infected strains of Corynebacterium diphtheriae

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Phage genomics: small is beautiful

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Holins: the protein clocks of bacteriophage infections

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Localization and properties of a silencing element near the mat3-M mating-type cassette of Schizosaccharomyces pombe.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Prokaryotes: the unseen majority

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Lysogenic conversion by a filamentous phage encoding cholera toxin

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Ion diffusion modified by tortuosity and volume fraction in the extracellular microenvironment of the rat cerebellum

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Control of bacteriophage lambda CII activity by bacteriophage and host functions

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Interactions between satellite bacteriophage P4 and its helpers

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

The Escherichia coli CRISPR system protects from λ lysogenization, lysogens, and prophage induction

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

The population biology of bacterial viruses: why be temperate

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

A quantifiable phenotype of viral propagation

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Replication of viruses in a growing plaque: a reaction-diffusion model.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Bacteriophage lambda PaPa: not the mother of all lambda phages.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Local migration promotes competitive restraint in a host-pathogen 'tragedy of the commons'.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Approximate solution to the speed of spreading viruses.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Quantitative dual-probe microdialysis: evaluation of [3H]mannitol diffusion in agar and rat striatum.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

The gene for toxic shock toxin is carried by a family of mobile pathogenicity islands in Staphylococcus aureus

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

Appendix: a model of plaque formation.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4886755

A genetic study of the temperate coliphage

19 August 2018

1 reference

12 December 2020

Inversion of the G DNA segment of phage Mu controls phage infectivity

1 reference

12 December 2020

Lysogenization by bacteriophage lambda. I. Multiple infection and the lysogenic response

1 reference

12 December 2020

Minimal gene regulatory circuits that can count like bacteriophage lambda

1 reference

12 December 2020

The growth of viral plaques during the enlargement phase

1 reference

12 December 2020

Activation of the lambda int gene by the cII and cIII gene products

1 reference

12 December 2020

Isolation, characterization and deletion mapping of amber mutations in the cII gene of phage λ

1 reference

12 December 2020

Amplification and spread of viruses in a growing plaque

1 reference

12 December 2020

Lysogenization by bacteriophage lambda. III. Multiplicity dependent phenomena occuring upon infection by lambda

1 reference

12 December 2020

Mutations in a temperate bacteriophage affecting its ability to lysogenize Escherichia coli

1 reference

12 December 2020

Time-delayed spread of viruses in growing plaques

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.00965-15

1 reference

23 September 2017

1 reference

PMC publication ID

4886755

23 September 2017

PubMed publication ID

27068593

1 reference

PMC publication ID

4886755