Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome (Q41577326)

4 October 2017

Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome (English)

1 reference

4 October 2017

Igor Martianov

3

0 references

Irwin Davidson

object named as

Irwin Davidson

9

0 references

author name string

Mohamed-Amin Choukrallah

1

1 reference

4 October 2017

Dominique Kobi

2

1 reference

4 October 2017

W W M Pim Pijnappel

4

1 reference

4 October 2017

Nikolai Mischerikow

5

1 reference

4 October 2017

Tao Ye

6

1 reference

4 October 2017

Albert J R Heck

7

1 reference

4 October 2017

H Th Marc Timmers

8

1 reference

4 October 2017

19 October 2011

1 reference

4 October 2017

Nucleic Acids Research

1 reference

4 October 2017

40

1 reference

4 October 2017

4

1 reference

4 October 2017

1446-1459

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

4 October 2017

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP

1 reference

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seqMINER: an integrated ChIP-seq data interpretation platform

6 June 2018

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Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells

6 June 2018

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RNA synthesis precision is regulated by preinitiation complex turnover

6 June 2018

1 reference

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Chromatin interaction of TATA-binding protein is dynamically regulated in human cells

6 June 2018

1 reference

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TFIIA and the transactivator Rap1 cooperate to commit TFIID for transcription initiation

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Genome-wide analysis of POU3F2/BRN2 promoter occupancy in human melanoma cells reveals Kitl as a novel regulated target gene

6 June 2018

1 reference

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Quantitative mass spectrometry of TATA binding protein-containing complexes and subunit phosphorylations during the cell cycle

6 June 2018

1 reference

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Cell-specific interaction of retinoic acid receptors with target genes in mouse embryonic fibroblasts and embryonic stem cells

6 June 2018

1 reference

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Defining mechanisms that regulate RNA polymerase II transcription in vivo

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Recent advances in understanding the structure and function of general transcription factor TFIID.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

GPAT: retrieval of genomic annotation from large genomic position datasets.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Model-based analysis of ChIP-Seq (MACS)

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Cooperative action of NC2 and Mot1p to regulate TATA-binding protein function across the genome

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

6 June 2018

1 reference

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Mammalian RNA polymerase II core promoters: insights from genome-wide studies

6 June 2018

1 reference

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The general transcription machinery and general cofactors

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Mutational analysis of BTAF1-TBP interaction: BTAF1 can rescue DNA-binding defective TBP mutants

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

TAF4 inactivation in embryonic fibroblasts activates TGF beta signalling and autocrine growth.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Diversified transcription initiation complexes expand promoter selectivity and tissue-specific gene expression

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Crystal structure of a transcription factor IIIB core interface ternary complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

A shared surface of TBP directs RNA polymerase II and III transcription via association with different TFIIB family members

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

RNA polymerase II transcription in murine cells lacking the TATA binding protein

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Structure and function of a human TAFII250 double bromodomain module

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

MOT1 can activate basal transcription in vitro by regulating the distribution of TATA binding protein between promoter and nonpromoter sites

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Molecular genetics of the RNA polymerase II general transcriptional machinery

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Cloning and biochemical characterization of TAF-172, a human homolog of yeast Mot1.

6 June 2018

1 reference

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Cloning of the cDNA for the TATA-binding protein-associated factorII170 subunit of transcription factor B-TFIID reveals homology to global transcription regulators in yeast and Drosophila

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Radical mutations reveal TATA-box binding protein surfaces required for activated transcription in vivo.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Biochemistry and structural biology of transcription factor IID (TFIID)

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Crystal structure of a yeast TFIIA/TBP/DNA complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Protein-protein interactions in eukaryotic transcription initiation: structure of the preinitiation complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

TBP, a universal eukaryotic transcription factor?

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Multiple regions of TBP participate in the response to transcriptional activators in vivo

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Crystal structure of a TFIIB-TBP-TATA-element ternary complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

The N-terminal domain of the human TATA-binding protein plays a role in transcription from TATA-containing RNA polymerase II and III promoters

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Composition of transcription factor B-TFIID

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

TAC, a TBP-sans-TAFs complex containing the unprocessed TFIIAalphabeta precursor and the TFIIAgamma subunit

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Selective Isolation at the Femtomole Level of Phosphopeptides from Proteolytic Digests Using 2D-NanoLC-ESI-MS/MS and Titanium Oxide Precolumns

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3287176

Selective recruitment of TAFs by yeast upstream activating sequences. Implications for eukaryotic promoter structure

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22013162

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22013162

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKR802

1 reference

4 October 2017

1 reference

4 October 2017

PubMed publication ID

22013162

1 reference