Human endogenous retrovirus (HERVK9) structural polymorphism with haplotypic HLA-A allelic associations (Q41831343)

12 October 2017

Human endogenous retrovirus (HERVK9) structural polymorphism with haplotypic HLA-A allelic associations (English)

1 reference

12 October 2017

Jerzy K Kulski

1

1 reference

12 October 2017

Atsuko Shigenari

2

1 reference

12 October 2017

Takashi Shiina

3

1 reference

12 October 2017

Masao Ota

4

1 reference

12 October 2017

Kazuyoshi Hosomichi

5

1 reference

12 October 2017

Ian James

6

1 reference

12 October 2017

Hidetoshi Inoko

7

1 reference

12 October 2017

language of work or name

English

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publication date

30 August 2008

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12 October 2017

13

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inferred from page(s)

published in

Genetics

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12 October 2017

180

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12 October 2017

1

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12 October 2017

445-457

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Dynamics of the Linkage Disequilibrium Function under Models of Gene-Frequency Hitchhiking

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

High-throughput DNA typing of HLA-A, -B, -C, and -DRB1 loci by a PCR-SSOP-Luminex method in the Japanese population.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Human endogenous retroviruses in the primate lineage and their influence on host genomes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Polymorphic Alu insertions within the Major Histocompatibility Complex class I genomic region: a brief review.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Comprehensive analysis of human endogenous retrovirus transcriptional activity in human tissues with a retrovirus-specific microarray

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

An update of the HLA genomic region, locus information and disease associations: 2004.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Haploview: analysis and visualization of LD and haplotype maps

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Complete MHC haplotype sequencing for common disease gene mapping

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Human endogenous retrovirus K solo-LTR formation and insertional polymorphisms: implications for human and viral evolution

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

New allele frequency database: http://www.allelefrequencies.net

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

The association between HLA-A alleles and an Alu dimorphism near HLA-G.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

The endogenous retroviral insertion in the human complement C4 gene modulates the expression of homologous genes by antisense inhibition

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

A 356-Kb sequence of the subtelomeric part of the MHC Class I region

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Many human endogenous retrovirus K (HERV-K) proviruses are unique to humans

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Genomics of the major histocompatibility complex: haplotypes, duplication, retroviruses and disease

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Toward a phylogenetic classification of Primates based on DNA evidence complemented by fossil evidence

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

From genotypes to genes: doubling the sample size

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Strong balancing selection at HLA loci: evidence from segregation in South Amerindian families

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Identification of a novel family of human endogenous retroviruses and characterization of one family member, HERV-K(C4), located in the complement C4 gene cluster.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Characterization of novel reverse transcriptase encoding human endogenous retroviral sequences similar to type A and type B retroviruses: differential transcription in normal human tissues

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

The dichotomous size variation of human complement C4 genes is mediated by a novel family of endogenous retroviruses, which also establishes species-specific genomic patterns among Old World primates

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

A composite estimate of primate phylogeny

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Hitchhiking: a comparison of linkage and partial selfing.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Strategies for characterizing highly polymorphic markers in human gene mapping

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Polymorphism and balancing selection at major histocompatibility complex loci

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

HLA-A, -B, -C, -DRB1 allele and haplotype frequencies in an African American population.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Evidence of balancing selection at the HLA-G promoter region.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

ERVK9, transposons and the evolution of MHC class I duplicons within the alpha-block of the human and chimpanzee.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Detection of retroviral antisense transcripts and promoter activity of the HERV-K(C4) insertion in the MHC class III region

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Rhesus macaque class I duplicon structures, organization, and evolution within the alpha block of the major histocompatibility complex.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Comparison between two human endogenous retrovirus (HERV)-rich regions within the major histocompatibility complex

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Pathogen-Driven Selection and Worldwide HLA Class I Diversity

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2535695

Rapid detection of the ERV-K(C4) retroviral insertion reveals further structural polymorphism of the complement C4 genes in old world primates

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18757922

12 December 2020

inferred from PubMed ID database lookup

Insertional polymorphisms of full-length endogenous retroviruses in humans

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18757922

12 December 2020

inferred from PubMed ID database lookup

SURVIVAL PROCESS OF LINKED MUTANT GENES.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18757922

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1534/GENETICS.108.090340

1 reference

12 October 2017

1 reference

12 October 2017

PubMed publication ID

18757922

1 reference