Rapid speciation with gene flow following the formation of Mt. Etna. (Q41834168)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23973865%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

title

Rapid speciation with gene flow following the formation of Mt. Etna (English)

1 reference

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8 March 2020

1 reference

1 reference

1 reference

1

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8 March 2020

Dmitry A. Filatov

series ordinal

4

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8 March 2020

3

Simon J Hiscock

1 reference

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8 March 2020

author name string

Thomas E Batstone

series ordinal

2

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8 March 2020

publication date

1 January 2013

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Genome Biology and Evolution

8 March 2020

published in

1 reference

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8 March 2020

volume

5

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8 March 2020

issue

9

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8 March 2020

page(s)

1704-1715

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Recent ecological selection on regulatory divergence is shaping clinal variation in senecio on Mount Etna.

8 March 2020

cites work

1 reference

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Hybridization and speciation

6 June 2018

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Exogenous selection shapes germination behaviour and seedling traits of populations at different altitudes in a Senecio hybrid zone

6 June 2018

1 reference

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Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

6 June 2018

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The genomic basis of adaptive evolution in threespine sticklebacks

6 June 2018

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Phylogenomic analysis of transcriptome data elucidates co-occurrence of a paleopolyploid event and the origin of bimodal karyotypes in Agavoideae (Asparagaceae).

6 June 2018

1 reference

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Genomic determinants of protein evolution and polymorphism in Arabidopsis.

6 June 2018

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Are there laws of genome evolution?

6 June 2018

1 reference

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

6 June 2018

1 reference

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Do interactions between plant and soil biota change with elevation? A study on Fagus sylvatica

6 June 2018

1 reference

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The complete chloroplast genome of 17 individuals of pest species Jacobaea vulgaris: SNPs, microsatellites and barcoding markers for population and phylogenetic studies

6 June 2018

1 reference

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Applications of next generation sequencing in molecular ecology of non-model organisms

6 June 2018

1 reference

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Optimization of de novo transcriptome assembly from next-generation sequencing data

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

A likelihood ratio test of speciation with gene flow using genomic sequence data

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

BLAST+: architecture and applications

6 June 2018

1 reference

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Processing and population genetic analysis of multigenic datasets with ProSeq3 software.

6 June 2018

1 reference

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The Sequence Alignment/Map format and SAMtools

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Harnessing genomics for evolutionary insights

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Divergent selection and heterogeneous genomic divergence

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patterns of duplicate gene retention after millions of years

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Molecular demographic history of the annual sunflowers Helianthus annuus and H. petiolaris--large effective population sizes and rates of long-term gene flow

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

The value of sampling anomalous taxa in phylogenetic studies: major clades of the Asteraceae revealed

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

The use of 'altitude' in ecological research

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

PAML 4: phylogenetic analysis by maximum likelihood

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Evolutionary systems biology: links between gene evolution and function

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Hybridization and adaptive radiation

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Why highly expressed proteins evolve slowly

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

The evolutionary dynamics of plant duplicate genes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Bayes empirical bayes inference of amino acid sites under positive selection

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Duplicated genes evolve slower than singletons despite the initial rate increase

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Preferential duplication of conserved proteins in eukaryotic genomes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Likelihood and Bayes estimation of ancestral population sizes in hominoids using data from multiple loci

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Molecular phylogeography, reticulation, and lineage sorting in Mediterranean Senecio sect. Senecio (Asteraceae)

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Codon-substitution models for heterogeneous selection pressure at amino acid sites

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Simple methods for testing the molecular evolutionary clock hypothesis.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Basic local alignment search tool

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Factors that contribute to variation in evolutionary rate among Arabidopsis genes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Recent, allopatric, homoploid hybrid speciation: the origin of Senecio squalidus (Asteraceae) in the British Isles from a hybrid zone on Mount Etna, Sicily.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

The Effect of Multifunctionality on the Rate of Evolution in Yeast

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3787679

Pollen competition among two species of Senecio (Asteraceae) that form a hybrid zone on Mt. Etna, Sicily

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23973865

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Adaptation and selection in theSenecio(Asteraceae) hybrid zone on Mount Etna, Sicily

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23973865

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/GBE/EVT127

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23973865%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23973865%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

PubMed publication ID

23973865

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23973865%20AND%20SRC:MED&resulttype=core&format=json