CTGC motifs within the HIV core promoter specify Tat-responsive pre-initiation complexes (Q41935503)

14 October 2017

CTGC motifs within the HIV core promoter specify Tat-responsive pre-initiation complexes (English)

1 reference

14 October 2017

Emmanuelle Wilhelm

1

1 reference

14 October 2017

Marie-Christine Doyle

2

1 reference

14 October 2017

Isaac Nzaramba

3

1 reference

14 October 2017

Alexandre Magdzinski

4

1 reference

14 October 2017

Nancy Dumais

5

1 reference

14 October 2017

Brendan Bell

6

1 reference

14 October 2017

26 July 2012

1 reference

14 October 2017

1 reference

14 October 2017

9

1 reference

14 October 2017

62

1 reference

https://scigraph.springernature.com/pub.10.1186/1742-4690-9-62

14 October 2017

0 references

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Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation

5 June 2018

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HIV persistence and the prospect of long-term drug-free remissions for HIV-infected individuals

5 June 2018

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5 June 2018

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RNA-mediated displacement of an inhibitory snRNP complex activates transcription elongation

5 June 2018

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SNPs in the HIV-1 TATA box and the AIDS pandemic

5 June 2018

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HIV-1 Tat assembles a multifunctional transcription elongation complex and stably associates with the 7SK snRNP

5 June 2018

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HIV-1 Tat and host AFF4 recruit two transcription elongation factors into a bifunctional complex for coordinated activation of HIV-1 transcription

5 June 2018

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The human Mediator complex: a versatile, genome-wide regulator of transcription

5 June 2018

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Promoting developmental transcription

5 June 2018

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Molecular control of HIV-1 postintegration latency: implications for the development of new therapeutic strategies

5 June 2018

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Cryo-EM reveals promoter DNA binding and conformational flexibility of the general transcription factor TFIID.

5 June 2018

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Understanding HIV-1 latency provides clues for the eradication of long-term reservoirs

5 June 2018

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HIV reservoirs, latency, and reactivation: prospects for eradication

5 June 2018

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Regulation of gene expression via the core promoter and the basal transcriptional machinery.

5 June 2018

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TFIIB recognition elements control the TFIIA-NC2 axis in transcriptional regulation

5 June 2018

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TATA-binding protein variants that bypass the requirement for Mot1 in vivo

5 June 2018

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The initiator core promoter element antagonizes repression of TATA-directed transcription by negative cofactor NC2

5 June 2018

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Mammalian RNA polymerase II core promoters: insights from genome-wide studies

5 June 2018

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New problems in RNA polymerase II transcription initiation: matching the diversity of core promoters with a variety of promoter recognition factors.

5 June 2018

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A sequence motif in the simian virus 40 (SV40) early core promoter affects alternative splicing of transcribed mRNA.

5 June 2018

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Transcriptional repression of human immunodeficiency virus type 1 by AP-4

5 June 2018

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Tat gets the "green" light on transcription initiation

5 June 2018

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HIV-1 Tat stimulates transcription complex assembly through recruitment of TBP in the absence of TAFs

5 June 2018

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The human immunodeficiency virus type 1 promoter contains a CATA box instead of a TATA box for optimal transcription and replication.

5 June 2018

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The multicoloured world of promoter recognition complexes.

5 June 2018

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Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter

5 June 2018

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Promoter scanning for transcription inhibition with DNA-binding polyamides

5 June 2018

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Presence of host ICAM-1 in laboratory and clinical strains of human immunodeficiency virus type 1 increases virus infectivity and CD4(+)-T-cell depletion in human lymphoid tissue, a major site of replication in vivo

5 June 2018

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The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription

5 June 2018

1 reference

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Identification of hTAF(II)80 delta links apoptotic signaling pathways to transcription factor TFIID function

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Recruitment of the TATA-binding protein to the HIV-1 promoter is a limiting step for Tat transactivation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Inhibition of RNA polymerase II transcription in human cells by synthetic DNA-binding ligands

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Chemicals that footprint DNA: hitting HIV-1 in the minor groove

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Dysregulation through the NF-kappaB enhancer and TATA box of the human immunodeficiency virus type 1 subtype E promoter

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Promoter activity of Tat at steps subsequent to TATA-binding protein recruitment

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

TAR RNA decoys inhibit tat-activated HIV-1 transcription after preinitiation complex formation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

P-TEFb kinase is required for HIV Tat transcriptional activation in vivo and in vitro

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Transcription elongation factor P-TEFb is required for HIV-1 tat transactivation in vitro

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Biochemical and functional interaction of the human immunodeficiency virus type 1 Tat transactivator with the general transcription factor TFIIB.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Ras-responsiveness of the HIV-1 LTR requires RBF-1 and RBF-2 binding sites.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

hTAF(II)68, a novel RNA/ssDNA-binding protein with homology to the pro-oncoproteins TLS/FUS and EWS is associated with both TFIID and RNA polymerase II

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Interaction of human immunodeficiency virus type 1 Tat with a unique site of TFIID inhibits negative cofactor Dr1 and stabilizes the TFIID-TFIIA complex

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Human immunodeficiency virus type 1 long terminal repeat variants from 42 patients representing all stages of infection display a wide range of sequence polymorphism and transcription activity.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

The human immunodeficiency virus type 1 long terminal repeat specifies two different transcription complexes, only one of which is regulated by Tat

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Activation of a heterologous promoter by human immunodeficiency virus type 1 Tat requires Sp1 and is distinct from the mode of activation by acidic transcriptional activators.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

HIV-1 core promoter lacks a simple initiator element but contains a bipartite activator at the transcription start site.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Structure and function of the b/HLH/Z domain of USF

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Second-site long terminal repeat (LTR) revertants of replication-defective human immunodeficiency virus: effects of revertant TATA box motifs on virus infectivity, LTR-directed expression, in vitro RNA synthesis, and binding of basal transcription f

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Direct interaction of human TFIID with the HIV-1 transactivator tat

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Role of flanking E box motifs in human immunodeficiency virus type 1 TATA element function

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

In vitro interaction of the human immunodeficiency virus type 1 Tat transactivator and the general transcription factor TFIIB with the cellular protein TAP

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Unique TATA-binding protein-containing complexes and cofactors involved in transcription by RNA polymerases II and III.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Role of RNA structure in arginine recognition of TAR RNA.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

The N-terminal domain of the human TATA-binding protein plays a role in transcription from TATA-containing RNA polymerase II and III promoters

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Immunodeficiency virus rev trans-activator modulates the expression of the viral regulatory genes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Activation of the AIDS retrovirus promoter by the cellular transcription factor, Sp1.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Five intermediate complexes in transcription initiation by RNA polymerase II

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Definition of multiple, functionally distinct TATA elements, one of which is a target in the hsp70 promoter for E1A regulation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Human immunodeficiency virus type 1 LTR TATA and TAR region sequences required for transcriptional regulation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Cloning of the p50 DNA binding subunit of NF-kappa B: homology to rel and dorsal

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Functional heterogeneity of mammalian TATA-box sequences revealed by interaction with a cell-specific enhancer

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

An in vitro transcription analysis of early responses of the human immunodeficiency virus type 1 long terminal repeat to different transcriptional activators

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Detailed mutational analysis of TAR RNA: critical spacing between the bulge and loop recognition domains

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

tat regulates binding of the human immunodeficiency virus trans-activating region RNA loop-binding protein TRP-185.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Alternative pathway for induction of human immunodeficiency virus gene expression: involvement of the general transcription machinery.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Discrimination between related DNA sites by a single amino acid residue of Myc-related basic-helix-loop-helix proteins

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Functional roles for the TATA promoter and enhancers in basal and Tat-induced expression of the human immunodeficiency virus type 1 long terminal repeat

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

Contribution of the TATA motif to Tat-mediated transcriptional activation of human immunodeficiency virus gene expression

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

The human immunodeficiency virus long terminal repeat includes a specialised initiator element which is required for Tat-responsive transcription

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419132

18 August 2018

Tomio Tada 1934-2010.

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1742-4690-9-62

Regulation of Gene Expression by Multiple Forms of TFIID and Other Novel TAFII-Containing Complexes

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1742-4690-9-62

Promoter influences transcription elongation: TATA-box element mediates the assembly of processive transcription complexes responsive to cyclin-dependent kinase 9

21 January 2018

1 reference

12 December 2020

A universal real-time PCR assay for the quantification of group-M HIV-1 proviral load

1 reference

12 December 2020

Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome

1 reference

12 December 2020

Kick-sTARting HIV-1 transcription elongation by 7SK snRNP deporTATion

1 reference

12 December 2020

Probing endogenous RNA polymerase II pre-initiation complexes by electrophoretic mobility shift assay

1 reference

12 December 2020

The study of macromolecular complexes by quantitative proteomics

1 reference

12 December 2020

Evidence for functional interaction between the HIV-1 Tat transactivator and the TATA box binding protein in vivo

1 reference

12 December 2020

Identifiers

DOI

10.1186/1742-4690-9-62

1 reference

Dimensions Publication ID

14 October 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1742-4690-9-62

1 reference

14 October 2017

1 reference