Sxy induces a CRP-S regulon in Escherichia coli. (Q41965066)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19502395%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

title

Sxy induces a CRP-S regulon in Escherichia coli (English)

1 reference

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30 January 2020

1 reference

2

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30 January 2020

author name string

Sunita Sinha

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19502395%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Rosemary J Redfield

series ordinal

3

1 reference

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30 January 2020

publication date

5 June 2009

1 reference

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30 January 2020

published in

Journal of Bacteriology

1 reference

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30 January 2020

volume

191

1 reference

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30 January 2020

issue

16

1 reference

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30 January 2020

page(s)

5180-5195

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19502395%20AND%20SRC:MED&resulttype=core&format=json

Construction of non-polar mutants in Haemophilus influenzae using FLP recombinase technology.

30 January 2020

cites work

1 reference

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Transforming DNA uptake gene orthologs do not mediate spontaneous plasmid transformation in Escherichia coli

5 June 2018

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Type IV pili: e pluribus unum?

5 June 2018

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RNA secondary structure regulates the translation of sxy and competence development in Haemophilus influenzae

5 June 2018

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5 June 2018

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Biofilms formed by nontypeable Haemophilus influenzae in vivo contain both double-stranded DNA and type IV pilin protein

5 June 2018

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Non-canonical CRP sites control competence regulons in Escherichia coli and many other gamma-proteobacteria

5 June 2018

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5 June 2018

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5 June 2018

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Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

5 June 2018

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Escherichia coli competence gene homologs are essential for competitive fitness and the use of DNA as a nutrient

5 June 2018

1 reference

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The Cpx system of Escherichia coli, a strategic signaling pathway for confronting adverse conditions and for settling biofilm communities?

5 June 2018

1 reference

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Conserved and variable functions of the sigmaE stress response in related genomes

5 June 2018

1 reference

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Binding and transcriptional activation of non-flagellar genes by the Escherichia coli flagellar master regulator FlhD2C2.

5 June 2018

1 reference

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A novel CRP-dependent regulon controls expression of competence genes in Haemophilus influenzae.

5 June 2018

1 reference

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Demonstration of Type IV pilus expression and a twitching phenotype by Haemophilus influenzae

5 June 2018

1 reference

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EcoCyc: a comprehensive database resource for Escherichia coli

5 June 2018

1 reference

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Characterization of three new competence-regulated operons in Haemophilus influenzae.

5 June 2018

1 reference

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WebLogo: A Sequence Logo Generator

5 June 2018

1 reference

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Evolutionary history and higher order classification of AAA+ ATPases

5 June 2018

1 reference

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Regulatory sequence analysis tools

5 June 2018

1 reference

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Gibbs Recursive Sampler: finding transcription factor binding sites

5 June 2018

1 reference

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Bacterial ‘competence’ genes: signatures of active transformation, or only remnants?

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

FlhD/FlhC is a regulator of anaerobic respiration and the Entner-Doudoroff pathway through induction of the methyl-accepting chemotaxis protein Aer.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Natural genetic transformation of clinical isolates of Escherichia coli in urine and water

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

DNA as a Nutrient: Novel Role for Bacterial Competence Gene Homologs

5 June 2018

1 reference

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FlhD/FlhC-regulated promoters analyzed by gene array and lacZ gene fusions

5 June 2018

1 reference

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Pilus formation and protein secretion by the same machinery in Escherichia coli

5 June 2018

1 reference

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PpdD type IV pilin of Escherichia coli K-12 can Be assembled into pili in Pseudomonas aeruginosa

5 June 2018

1 reference

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Toxin-antitoxin modules may regulate synthesis of macromolecules during nutritional stress

5 June 2018

1 reference

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The COG database: a tool for genome-scale analysis of protein functions and evolution

5 June 2018

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Identification of Haemophilus influenzae Rd transformation genes using cassette mutagenesis

5 June 2018

1 reference

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5 June 2018

The anti-sigma factors

1 reference

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The gluconate high affinity transport of GntI in Escherichia coli involves a multicomponent complex system

5 June 2018

1 reference

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A new transformation-deficient mutant of Haemophilus influenzae Rd with normal DNA uptake.

5 June 2018

1 reference

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The Haemophilus influenzae dprABC genes constitute a competence-inducible operon that requires the product of the tfoX (sxy) gene for transcriptional activation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Who's competent and when: regulation of natural genetic competence in bacteria

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Genetic transformation in freshwater: Escherichia coli is able to develop natural competence

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Identification of two genes with prepilin-like leader sequences involved in type 4 fimbrial biogenesis in Pseudomonas aeruginosa

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Mechanism of adverse conditions causing lack of flagella in Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

The FlhD/FlhC complex, a transcriptional activator of the Escherichia coli flagellar class II operons

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Characterization of pilQ, a new gene required for the biogenesis of type 4 fimbriae in Pseudomonas aeruginosa

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

DNA sequence and characterization of Haemophilus influenzae dprA+, a gene required for chromosomal but not plasmid DNA transformation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Identification of a DNA transformation gene required for com101A+ expression and supertransformer phenotype in Haemophilus influenzae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Modulation of flagellar expression in Escherichia coli by acetyl phosphate and the osmoregulator OmpR.

5 June 2018

1 reference

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Characterization of a five-gene cluster required for the biogenesis of type 4 fimbriae in Pseudomonas aeruginosa

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Identification of a gene, pilV, required for type 4 fimbrial biogenesis in Pseudomonas aeruginosa, whose product possesses a pre-pilin-like leader sequence

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Transformation in Escherichia coli: stages in the process

5 June 2018

1 reference

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Transformation-defective Strains of Haemophilus influenzae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Defined Nongrowth Media for Stage II Development of Competence in Haemophilus influenzae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Production of abnormal proteins in E. coli stimulates transcription of lon and other heat shock genes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli.

5 June 2018

1 reference

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Induction of a heat shock-like response by unfolded protein in Escherichia coli: dependence on protein level not protein degradation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Transposon mutagenesis, characterization, and cloning of transformation genes of Haemophilus influenzae Rd.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

The single-stranded DNA-binding protein of Escherichia coli

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Nucleotide sequence of a cluster of genes involved in the transformation of Haemophilus influenzae Rd.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Product of the Pseudomonas aeruginosa gene pilD is a prepilin leader peptidase

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Sequence and transcriptional regulation of com101A, a locus required for genetic transformation in Haemophilus influenzae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Sequence-dependent contribution of distal binding domains to CAP protein-DNA binding affinity

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Characterisation of a Pseudomonas aeruginosa twitching motility gene and evidence for a specialised protein export system widespread in eubacteria

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

sxy-1, a Haemophilus influenzae mutation causing greatly enhanced spontaneous competence

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Donor DNA processing is blocked by a mutation in the com101A locus of Haemophilus influenzae

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Escherichia coli is naturally transformable in a novel transformation system.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Functional characterization of the competence protein DprA/Smf in Escherichia coli.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

The global transcriptional response of Escherichia coli to induced sigma 32 protein involves sigma 32 regulon activation followed by inactivation and degradation of sigma 32 in vivo.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Functional diversity of three different DsbA proteins from Neisseria meningitidis

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Only a small subset of the horizontally transferred chromosomal genes in Escherichia coli are translated into proteins.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Competence development by Haemophilus influenzae is regulated by the availability of nucleic acid precursors

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

DNA microarray detection of metabolic responses to protein overproduction in Escherichia coli

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Functions of the subunits in the FlhD(2)C(2) transcriptional master regulator of bacterial flagellum biogenesis and swarming

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Tandem repeat recombination induced by replication fork defects in Escherichia coli requires a novel factor, RadC.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Cloning and sequencing of the Haemophilus influenzae ssb gene encoding single-strand DNA-binding protein

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2725579

Extensive variation in natural competence in Haemophilus influenzae

18 August 2018

1 reference

12 December 2020

Transformation of Escherichia coli in foodstuffs

1 reference

12 December 2020

Reduced DNA binding and uptake in the absence of DsbA1 and DsbA2 of Neisseria meningitidis due to inefficient folding of the outer-membrane secretin PilQ

1 reference

12 December 2020

NfuA, a new factor required for maturing Fe/S proteins in Escherichia coli under oxidative stress and iron starvation conditions

1 reference

12 December 2020

CRP binding and transcription activation at CRP-S sites

1 reference

12 December 2020

Spectral properties of three quaternary arrangements of Pseudomonas pilin

1 reference

12 December 2020

A second prepilin peptidase gene in Escherichia coli K-12

1 reference

12 December 2020

Characterization of the Escherichia coli sigma E regulon

1 reference

12 December 2020

Novel sigmaF-dependent genes of Escherichia coli found using a specified promoter consensus

1 reference

12 December 2020

Minor pilin subunits are conserved in Vibrio cholerae type IV pili

1 reference

12 December 2020

Genome-wide profiling of promoter recognition by the two-component response regulator CpxR-P in Escherichia coli

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.00476-09

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19502395%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19502395%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

PubMed publication ID

19502395

1 reference