HIV-1 B-subtype capsid protein: a characterization of amino acid's conservation and its significant association with integrase signatures (Q42240376)

19 October 2017

HIV-1 B-subtype capsid protein: a characterization of amino acid's conservation and its significant association with integrase signatures (English)

1 reference

19 October 2017

Salvatore Dimonte

1

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19 October 2017

Muhammed Babakir-Mina

series ordinal

2

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19 October 2017

Stefano Aquaro

series ordinal

3

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19 October 2017

29 January 2014

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19 October 2017

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19 October 2017

48

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19 October 2017

3

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19 October 2017

429-437

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https://scigraph.springernature.com/pub.10.1007/s11262-014-1039-y

19 October 2017

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cites work

HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Multiple roles of the capsid protein in the early steps of HIV-1 infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

HIV-1 DNA Flap formation promotes uncoating of the pre-integration complex at the nuclear pore

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Revisiting HIV-1 uncoating

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Flexible use of nuclear import pathways by HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

The requirement for cellular transportin 3 (TNPO3 or TRN-SR2) during infection maps to human immunodeficiency virus type 1 capsid and not integrase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

The requirement for nucleoporin NUP153 during human immunodeficiency virus type 1 infection is determined by the viral capsid.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Superresolution imaging of HIV in infected cells with FlAsH-PALM

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Transportin 3 promotes a nuclear maturation step required for efficient HIV-1 integration.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Specific VpU codon changes were significantly associated with gp120 V3 tropic signatures in HIV-1 B-subtype.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

HIV-2 A-subtype gp125c₂-v₃-c₃ mutations and their association with CCR5 and CXCR4 tropism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Selected amino acid changes in HIV-1 subtype-C gp41 are associated with specific gp120(V3) signatures in the regulation of co-receptor usage

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Selected amino acid mutations in HIV-1 B subtype gp41 are associated with specific gp120v₃ signatures in the regulation of co-receptor usage

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Natural polymorphisms of HIV-1 subtype-C integrase coding region in a large group of ARV-naïve infected individuals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Natural polymorphisms of HIV-1 CRF01_AE integrase coding region in ARV-naïve individuals in Cambodia, Thailand and Vietnam: an ANRS AC12 working group study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Specific HIV-1 integrase polymorphisms change their prevalence in untreated versus antiretroviral-treated HIV-1-infected patients, all naive to integrase inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

BF integrase genes of HIV-1 circulating in São Paulo, Brazil, with a recurrent recombination region

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Head-to-tail dimers and interdomain flexibility revealed by the crystal structure of HIV-1 capsid protein (p24) complexed with a monoclonal antibody Fab.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Correlation of naturally occurring HIV-1 resistance to DEB025 with capsid amino acid polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Altered HIV-1 Gag protein interactions with cyclophilin A (CypA) on the acquisition of H219Q and H219P substitutions in the CypA binding loop

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

The V86M mutation in HIV-1 capsid confers resistance to TRIM5α by abrogation of cyclophilin A-dependent restriction and enhancement of viral nuclear import

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Rapid reversion of sequence polymorphisms dominates early human immunodeficiency virus type 1 evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Modulation of HIV-1 infectivity and cyclophilin A-dependence by Gag sequence and target cell type

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Assembly properties of the human immunodeficiency virus type 1 CA protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Structure of the Antiviral Assembly Inhibitor CAP-1 Complex with the HIV-1 CA Protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

X-ray structures of the hexameric building block of the HIV capsid

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Mutations in capsid major homology region affect assembly and membrane affinity of HIV-1 Gag.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Synthesis and biological evaluation of a new derivative of bevirimat that targets the Gag CA-SP1 cleavage site

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

New small-molecule inhibitor class targeting human immunodeficiency virus type 1 virion maturation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Full-length genomic sequencing and analysis of four HIV type 1 subtype B isolates circulating in the territory of Russia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Protective HLA class I alleles that restrict acute-phase CD8+ T-cell responses are associated with viral escape mutations located in highly conserved regions of human immunodeficiency virus type 1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Second-site suppressors of HIV-1 capsid mutations: restoration of intracellular activities without correction of intrinsic capsid stability defects

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Identifying and characterizing a functional HIV-1 reverse transcriptase-binding site on integrase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

On the role of four small hairpins in the HIV-1 RNA genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

How retroviruses select their genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Evidence that viral RNAs have evolved for efficient, two-stage packaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

Degenerate RNA packaging signals in the genome of Satellite Tobacco Necrosis Virus: implications for the assembly of a T=1 capsid

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

A study of the self-assembly process in a small spherical virus. Formation of organized structures from protein subunits in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-014-1039-Y

The HIV-1 passage from cytoplasm to nucleus: the process involving a complex exchange between the components of HIV-1 and cellular machinery to access nucleus and successful integration.

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24474329

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization and structural analysis of HIV-1 integrase conservation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24474329

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S11262-014-1039-Y

1 reference

Dimensions Publication ID

19 October 2017

0 references

1 reference