The fine-scale architecture of structural variants in 17 mouse genomes (Q42324829)

26 October 2017

The fine-scale architecture of structural variants in 17 mouse genomes (English)

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26 October 2017

7

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26 October 2017

Binnaz Yalcin

1

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Thomas M. Keane

object named as

Thomas M Keane

5

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author name string

Kim Wong

2

1 reference

26 October 2017

Amarjit Bhomra

3

1 reference

26 October 2017

Martin Goodson

4

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26 October 2017

David J Adams

6

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26 October 2017

1 January 2012

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26 October 2017

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26 October 2017

13

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26 October 2017

3

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26 October 2017

R18

1 reference

https://scigraph.springernature.com/pub.10.1186/gb-2012-13-3-r18

26 October 2017

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cites work

Characterizing complex structural variation in germline and somatic genomes

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Chromosome catastrophes involve replication mechanisms generating complex genomic rearrangements

29 May 2018

1 reference

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Sequence-based characterization of structural variation in the mouse genome

29 May 2018

1 reference

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Mouse genomic variation and its effect on phenotypes and gene regulation

29 May 2018

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Genome structural variation discovery and genotyping

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Break-induced replication is highly inaccurate

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

The genomic complexity of primary human prostate cancer

29 May 2018

1 reference

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Mapping copy number variation by population-scale genome sequencing

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Massive genomic rearrangement acquired in a single catastrophic event during cancer development

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Enhanced structural variant and breakpoint detection using SVMerge by integration of multiple detection methods and local assembly

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Novel common copy number variation for early onset extreme obesity on chromosome 11q11 identified by a genome-wide analysis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

A human genome structural variation sequencing resource reveals insights into mutational mechanisms

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Diversity of human copy number variation and multicopy genes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Dindel: accurate indel calls from short-read data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

De novo rates and selection of large copy number variation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Functional impact of global rare copy number variation in autism spectrum disorders

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Mutation spectrum revealed by breakpoint sequencing of human germline CNVs

29 May 2018

1 reference

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Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Copy number variant detection in inbred strains from short read sequence data

29 May 2018

1 reference

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Large, rare chromosomal deletions associated with severe early-onset obesity

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Computational methods for discovering structural variation with next-generation sequencing

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Origins and functional impact of copy number variation in the human genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Elucidating the genetic architecture of familial schizophrenia using rare copy number variant and linkage scans

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

LookSeq: A browser-based viewer for deep sequencing data

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

The DNA replication FoSTeS/MMBIR mechanism can generate genomic, genic and exonic complex rearrangements in humans

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Copy number variation at 1q21.1 associated with neuroblastoma

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Genomic disorders ten years on.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Extending genome-wide association studies to copy-number variation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Mapping and sequencing of structural variation from eight human genomes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Paired-end mapping reveals extensive structural variation in the human genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Copy-number variation and association studies of human disease

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Global variation in copy number in the human genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Primer3 on the WWW for general users and for biologist programmers

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Consed: a graphical tool for sequence finishing

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

Genetic dissection of a behavioral quantitative trait locus shows that Rgs2 modulates anxiety in mice.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

DNA repair mediated by endonuclease-independent LINE-1 retrotransposition.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3439969

High-resolution mapping of quantitative trait loci in outbred mice

17 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FGB-2012-13-3-R18

Genome-wide genetic association of complex traits in heterogeneous stock mice

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FGB-2012-13-3-R18

Genomic disorders: structural features of the genome can lead to DNA rearrangements and human disease traits

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22439878

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Shotgun sequence assembly and recent segmental duplications within the human genome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22439878

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2012-13-3-R18

1 reference

Dimensions Publication ID

26 October 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/gb-2012-13-3-r18

1 reference

26 October 2017

1 reference