Analysis of DNA processing reactions in bacterial conjugation by using suicide oligonucleotides. (Q42411932)

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2 January 2020

title

Analysis of DNA processing reactions in bacterial conjugation by using suicide oligonucleotides (English)

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2 January 2020

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5

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2 January 2020

María Lucas

2

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2 January 2020

Gabriel Moncalian

6

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2 January 2020

author name string

Blanca Gonzalez-Perez

1

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2 January 2020

Leonie A Cooke

3

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2 January 2020

Joseph S Vyle

4

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2 January 2020

language of work or name

English

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publication date

26 July 2007

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2 January 2020

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2 January 2020

volume

26

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2 January 2020

issue

16

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2 January 2020

page(s)

3847-3857

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Conjugative transfer can be inhibited by blocking relaxase activity within recipient cells with intrabodies.

2 January 2020

cites work

1 reference

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The Structure of the Minimal Relaxase Domain of MobA at 2.1 Å Resolution

28 May 2018

1 reference

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Unveiling the molecular mechanism of a conjugative relaxase: The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site.

28 May 2018

1 reference

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Examination of an inverted repeat within the F factor origin of transfer: context dependence of F TraI relaxase DNA specificity

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells

28 May 2018

1 reference

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Inter- and intramolecular determinants of the specificity of single-stranded DNA binding and cleavage by the F factor relaxase.

28 May 2018

1 reference

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Bacterial conjugation: a potential tool for genomic engineering

28 May 2018

1 reference

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The F-plasmid TraI protein contains three functional domains required for conjugative DNA strand transfer

28 May 2018

1 reference

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A classification scheme for mobilization regions of bacterial plasmids.

28 May 2018

1 reference

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Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC

28 May 2018

1 reference

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Structural Insights into Single-Stranded DNA Binding and Cleavage by F Factor TraI

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

The two active-site tyrosine residues of the a protein play non-equivalent roles during initiation of rolling circle replication of bacteriophage p2.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Catalytic mechanism of DNA topoisomerase IB.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Recognition of oriT for DNA processing at termination of a round of conjugal transfer

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Two active-site tyrosyl residues of protein TrwC act sequentially at the origin of transfer during plasmid R388 conjugation

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Mechanisms of initiation and termination reactions in conjugative DNA processing. Independence of tight substrate binding and catalytic activity of relaxase (TraI) of IncPalpha plasmid RP4.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Purification of the large mobilization protein of plasmid RSF1010 and characterization of its site-specific DNA-cleaving/DNA-joining activity

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Active site of the replication protein of the rolling circle plasmid pC194.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

DNA processing reactions in bacterial conjugation

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Analysis of the variable endpoints generated by one-ended transposition of Tn21.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

IS91 transposase is related to the rolling-circle-type replication proteins of the pUB110 family of plasmids

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

oriT-processing and regulatory roles of TrwA protein in plasmid R388 conjugation.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Functional domains in protein TrwC of plasmid R388: dissected DNA strand transferase and DNA helicase activities reconstitute protein function.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Preferential synapsis of loxP sites drives ordered strand exchange in Cre-loxP site-specific recombination.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Structure-function analysis of Escherichia coli DNA helicase I reveals non-overlapping transesterase and helicase domains.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Suicide substrates reveal properties of the homology-dependent steps during integrative recombination of bacteriophage lambda.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Nicking activity of TrwC directed against the origin of transfer of the IncW plasmid R388.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1952221

Subdomain organization and catalytic residues of the F factor TraI relaxase domain

16 August 2018

1 reference

12 December 2020

Computer-assisted dissection of rolling circle DNA replication

1 reference

12 December 2020

The mechanism of sequence-specific DNA cleavage and strand transfer by phi X174 gene A* protein

1 reference

12 December 2020

Replication-specific inactivation of the pT181 plasmid initiator protein

1 reference

12 December 2020

A new domain of conjugative relaxase TrwC responsible for efficient oriT-specific recombination on minimal target sequences

1 reference

12 December 2020

Identifiers

DOI

10.1038/SJ.EMBOJ.7601806

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17660746%20AND%20SRC:MED&resulttype=core&format=json

2 January 2020

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2 January 2020

PubMed publication ID

17660746

1 reference