BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments. (Q42552965)

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27 December 2019

title

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments (English)

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27 December 2019

1 reference

4

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27 December 2019

Juan M. Vaquerizas

6

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27 December 2019

Pablo Minguez

2

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27 December 2019

Eva Alloza

5

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27 December 2019

Joaquín Dopazo

10

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27 December 2019

1

Fátima Al-Shahrour

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27 December 2019

author name string

Joaquín Tárraga

3

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27 December 2019

Lucía Conde

7

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27 December 2019

Christian Blaschke

8

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27 December 2019

Javier Vera

9

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27 December 2019

language of work or name

English

0 references

publication date

1 July 2006

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27 December 2019

published in

Nucleic Acids Research

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27 December 2019

volume

34

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27 December 2019

issue

Web Server issue

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27 December 2019

page(s)

W472-6

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Status of text-mining techniques applied to biomedical text

27 December 2019

cites work

1 reference

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cisRED: a database system for genome-scale computational discovery of regulatory elements

28 May 2018

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The Universal Protein Resource (UniProt): an expanding universe of protein information

28 May 2018

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

28 May 2018

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Towards a proteome-scale map of the human protein–protein interaction network

28 May 2018

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A human protein-protein interaction network: a resource for annotating the proteome

28 May 2018

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Ontological analysis of gene expression data: current tools, limitations, and open problems

28 May 2018

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Recent additions and improvements to the Onto-Tools

28 May 2018

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GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data

28 May 2018

1 reference

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BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments.

28 May 2018

1 reference

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Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information

28 May 2018

1 reference

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28 May 2018

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InterPro, progress and status in 2005

28 May 2018

1 reference

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Systems biology in drug discovery

28 May 2018

1 reference

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New challenges in gene expression data analysis and the extended GEPAS

28 May 2018

1 reference

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Coexpression analysis of human genes across many microarray data sets

28 May 2018

1 reference

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The evolutionary dynamics of eukaryotic gene order

28 May 2018

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FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

28 May 2018

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A global test for groups of genes: testing association with a clinical outcome

28 May 2018

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The KEGG resource for deciphering the genome

28 May 2018

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Integrating 'omic' information: a bridge between genomics and systems biology

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538844

A gene-coexpression network for global discovery of conserved genetic modules

28 May 2018

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MATCH: A tool for searching transcription factor binding sites in DNA sequences

28 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538844

GEPAS: A web-based resource for microarray gene expression data analysis

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538844

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

28 May 2018

1 reference

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Global functional profiling of gene expression.

28 May 2018

1 reference

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The human transcriptome map: clustering of highly expressed genes in chromosomal domains

28 May 2018

1 reference

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Gene ontology: tool for the unification of biology

28 May 2018

1 reference

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TRANSFAC: an integrated system for gene expression regulation

28 May 2018

1 reference

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Automatic extraction of keywords from scientific text: application to the knowledge domain of protein families

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538844

28 May 2018

Identifiers

DOI

10.1093/NAR/GKL172

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16845052%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/Al-ShahrourMTMAVCBVD06

27 December 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

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27 December 2019

PubMed publication ID

16845052

1 reference