Nucleotides from -16 to -12 determine specific promoter recognition by bacterial sigmaS-RNA polymerase. (Q42603337)

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5 November 2019

title

Nucleotides from -16 to -12 determine specific promoter recognition by bacterial sigmaS-RNA polymerase (English)

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5 November 2019

3

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author name string

Stephan Lacour

series ordinal

1

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5 November 2019

Annie Kolb

series ordinal

2

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language of work or name

English

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publication date

9 July 2003

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Journal of Biological Chemistry

5 November 2019

published in

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5 November 2019

volume

278

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5 November 2019

issue

39

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5 November 2019

page(s)

37160-37168

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The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability

5 November 2019

cites work

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Heterogeneity of the principal sigma factor in Escherichia coli: the rpoS gene product, sigma 38, is a second principal sigma factor of RNA polymerase in stationary-phase Escherichia coli.

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The sigma 70 family: sequence conservation and evolutionary relationships

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What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S).

21 January 2018

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Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides

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Interplay of global regulators and cell physiology in the general stress response of Escherichia coli

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Stationary phase gene regulation: what makes an Escherichia coli promoter sigmaS-selective?

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Functional modulation of Escherichia coli RNA polymerase

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Promoter determinants for Escherichia coli RNA polymerase holoenzyme containing sigma 38 (the rpoS gene product)

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Sequences in the -35 region of Escherichia coli rpoS-dependent genes promote transcription by E sigma S.

21 January 2018

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Positioning of sigma(S), the stationary phase sigma factor, in Escherichia coli RNA polymerase-promoter open complexes

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Mechanism of specific recognition of the aidB promoter by sigma(S)-RNA polymerase

21 January 2018

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Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters

21 January 2018

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Location of close contacts between Escherichia coli RNA polymerase and guanine residues at promoters either with or without consensus -35 region sequences

21 January 2018

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Organization of open complexes at Escherichia coli promoters. Location of promoter DNA sites close to region 2.5 of the sigma70 subunit of RNA polymerase

21 January 2018

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DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study

21 January 2018

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Regulatory responses of the adaptive response to alkylation damage: a simple regulon with complex regulatory features

21 January 2018

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Transcriptional responses to DNA damage

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Transcriptional activation of the Escherichia coli adaptive response gene aidB is mediated by binding of methylated Ada protein. Evidence for a new consensus sequence for Ada-binding sites.

21 January 2018

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Induction of the Escherichia coli aidB gene under oxygen-limiting conditions requires a functional rpoS (katF) gene

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Structure and transcriptional regulation of the Escherichia coli adaptive response gene aidB.

21 January 2018

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Molecular analysis of the regulation of csiD, a carbon starvation-inducible gene in Escherichia coli that is exclusively dependent on sigma s and requires activation by cAMP-CRP.

21 January 2018

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hrp genes of Erwinia chrysanthemi 3937 are important virulence factors.

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sigma factor selectivity of Escherichia coli RNA polymerase: role for CRP, IHF and lrp transcription factors

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Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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A consensus structure for sigma S-dependent promoters

21 January 2018

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Promoter recognition and discrimination by EsigmaS RNA polymerase

21 January 2018

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Mode of promoter recognition by the Escherichia coli RNA polymerase holoenzyme containing the sigma S subunit: identification of the recognition sequence of the fic promoter

21 January 2018

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Involvement of differential efficiency of transcription by esigmas and esigma70 RNA polymerase holoenzymes in growth phase regulation of the Escherichia coli osmE promoter

21 January 2018

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The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an "extended minus 10" promoter

21 January 2018

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Ada protein-RNA polymerase sigma subunit interaction and alpha subunit-promoter DNA interaction are necessary at different steps in transcription initiation at the Escherichia coli Ada and aidB promoters

21 January 2018

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The leucine-responsive regulatory protein (Lrp) acts as a specific repressor for sigma s-dependent transcription of the Escherichia coli aidB gene

21 January 2018

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Sequence determinants for the recognition of the fork junction DNA containing the -10 region of promoter DNA by E. coli RNA polymerase

21 January 2018

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21 January 2018

Identifiers

DOI

10.1074/JBC.M305281200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12853450%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

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