powsimR: power analysis for bulk and single cell RNA-seq experiments. (Q42696150)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

title

powsimR: power analysis for bulk and single cell RNA-seq experiments (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

0 references

1 reference

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

Christoph Ziegenhain

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

4

Wolfgang Enard

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

5

Ines Hellmann

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

author name string

Swati Parekh

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

language of work or name

English

0 references

publication date

1 November 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

volume

33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

issue

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

page(s)

3486-3488

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29036287%20AND%20SRC:MED&resulttype=core&format=json

Statistical design and analysis of RNA sequencing data

7 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Design and computational analysis of single-cell RNA-sequencing experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

A survey of best practices for RNA-seq data analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Validation of noise models for single-cell transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

CEL-Seq: single-cell RNA-Seq by multiplexed linear amplification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Bayesian approach to single-cell differential expression analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

A statistical approach for identifying differential distributions in single-cell RNA-seq experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Pooling across cells to normalize single-cell RNA sequencing data with many zero counts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Goodness-of-fit tests and model diagnostics for negative binomial regression of RNA sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Full-length RNA-seq from single cells using Smart-seq2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Single-cell mRNA quantification and differential analysis with Census

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

limma powers differential expression analyses for RNA-sequencing and microarray studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Beta-Poisson model for single-cell RNA-seq data analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Massively parallel digital transcriptional profiling of single cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435

Comparative Analysis of Single-Cell RNA Sequencing Methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTX435