BioMet Toolbox: genome-wide analysis of metabolism (Q42739003)

6 November 2017

BioMet Toolbox: genome-wide analysis of metabolism (English)

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6 November 2017

7

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6 November 2017

8

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Roberto Olivares-Hernández

6 November 2017

object named as

Roberto Olivares-Hernández

series ordinal

2

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Intawat Nookaew

series ordinal

6

object named as

Intawat Nookaew

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6 November 2017

3

Rasmus Agren

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6 November 2017

5

Wanwipa Vongsangnak

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6 November 2017

Marija Cvijovic

1

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6 November 2017

Niklas Dahr

series ordinal

4

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6 November 2017

language of work or name

English

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publication date

18 May 2010

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6 November 2017

Nucleic Acids Research

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6 November 2017

38

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6 November 2017

Web Server issue

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6 November 2017

W144-9

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Creative Commons Attribution-NonCommercial 2.5 Generic

6 November 2017

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Applications of genome-scale metabolic reconstructions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

CycSim--an online tool for exploring and experimenting with genome-scale metabolic models

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Analysis of Aspergillus nidulans metabolism at the genome-scale

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Architecture of transcriptional regulatory circuits is knitted over the topology of bio-molecular interaction networks

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Impact of systems biology on metabolic engineering of Saccharomyces cerevisiae

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Metatool 5.0: fast and flexible elementary modes analysis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Metabolic engineering of Escherichia coli for enhanced production of succinic acid, based on genome comparison and in silico gene knockout simulation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Modeling Lactococcus lactis using a genome-scale flux model

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Genome-scale analysis of Streptomyces coelicolor A3(2) metabolism

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Uncovering transcriptional regulation of metabolism by using metabolic network topology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

It is all about metabolic fluxes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Cytoscape: a software environment for integrated models of biomolecular interaction networks

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Discovering regulatory and signalling circuits in molecular interaction networks

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Metabolic modelling of microbes: the flux-balance approach

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

In silico genome-scale reconstruction and validation of the Corynebacterium glutamicum metabolic network

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896146

16 August 2018

Identifiers

DOI

10.1093/NAR/GKQ404

1 reference

journals/nar/CvijovicOADVNPN10

6 November 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

6 November 2017

1 reference