WASP: allele-specific software for robust molecular quantitative trait locus discovery (Q42785682)

7 November 2017

WASP: allele-specific software for robust molecular quantitative trait locus discovery (English)

1 reference

7 November 2017

0 references

quantitative trait locus

1 reference

inferred from title

author

Jonathan K. Pritchard

series ordinal

4

object named as

Jonathan K Pritchard

1 reference

7 November 2017

Bryce van de Geijn

1

1 reference

PMCID

4626402

7 November 2017

Graham McVicker

series ordinal

2

1 reference

PMCID

4626402

7 November 2017

Yoav Gilad

series ordinal

3

1 reference

7 November 2017

14 September 2015

1 reference

7 November 2017

1 reference

7 November 2017

12

1 reference

7 November 2017

11

1 reference

7 November 2017

1061-1063

1 reference

https://scigraph.springernature.com/pub.10.1038/nmeth.3582

7 November 2017

0 references

cites work

QuASAR: quantitative allele-specific analysis of reads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Comparing computational methods for identification of allele-specific expression based on next generation sequencing data.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Identification of genetic variants that affect histone modifications in human cells

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Transcriptome and genome sequencing uncovers functional variation in humans

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Differential analysis of gene regulation at transcript resolution with RNA-seq

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Streaming fragment assignment for real-time analysis of sequencing experiments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Summarizing and correcting the GC content bias in high-throughput sequencing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

DNase I sensitivity QTLs are a major determinant of human expression variation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

A statistical framework for eQTL mapping using RNA-seq data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

AlleleSeq: analysis of allele-specific expression and binding in a network framework

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Analysis and design of RNA sequencing experiments for identifying isoform regulation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Differential expression analysis for sequence count data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Understanding mechanisms underlying human gene expression variation with RNA sequencing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Transcriptome genetics using second generation sequencing in a Caucasian population

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

The Sequence Alignment/Map format and SAMtools

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4626402

https://api.fatcat.wiki/v0/release/q3dupcbuxzbvxchgiy7ff2wuvm

27 May 2018

Identifiers

1 reference

30 July 2022

release_q3dupcbuxzbvxchgiy7ff2wuvm

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/q3dupcbuxzbvxchgiy7ff2wuvm

30 July 2022

https://api.fatcat.wiki/v0/release/q3dupcbuxzbvxchgiy7ff2wuvm

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/q3dupcbuxzbvxchgiy7ff2wuvm

1 reference

30 July 2022