Morphing the minimal and full-length hammerhead ribozymes: implications for the cleavage mechanism (Q43557280)

24 November 2017

title

Morphing the minimal and full-length hammerhead ribozymes: implications for the cleavage mechanism (English)

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24 November 2017

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William G Scott

1

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24 November 2017

publication date

1 July 2007

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24 November 2017

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24 November 2017

volume

388

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24 November 2017

issue

7

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24 November 2017

page(s)

727-735

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The structure-function dilemma of the hammerhead ribozyme

24 November 2017

cites work

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https://api.crossref.org/works/10.1515%2FBC.2007.087

The distribution of RNA motifs in natural sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

A helical twist-induced conformational switch activates cleavage in the hammerhead ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

MolMovDB: analysis and visualization of conformational change and structural flexibility

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Coot: model-building tools for molecular graphics

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

The Database of Macromolecular Motions: new features added at the decade mark

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Self-cleavage of virusoid RNA is performed by the proposed 55-nucleotide active site

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Model for general acid-base catalysis by the hammerhead ribozyme: pH-activity relationships of G8 and G12 variants at the putative active site

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Sequences required for self-catalysed cleavage of the satellite RNA of tobacco ringspot virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

The morph server: a standardized system for analyzing and visualizing macromolecular motions in a database framework

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Tertiary contacts distant from the active site prime a ribozyme for catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Does a single metal ion bridge the A-9 and scissile phosphate groups in the catalytically active hammerhead ribozyme structure?

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

A pH-dependent conformational change, rather than the chemical step, appears to be rate-limiting in the hammerhead ribozyme cleavage reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

The structural basis of hammerhead ribozyme self-cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Capture and visualization of a catalytic RNA enzyme-product complex using crystal lattice trapping and X-ray holographic reconstruction

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

When to believe what you see.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Three-dimensional structure of a hammerhead ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Autolytic processing of dimeric plant virus satellite RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Sequence requirements of the hammerhead RNA self-cleavage reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

RNA structure, metal ions, and catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Rapid Crystallization of Chemically Synthesized Hammerhead RNAs using a Double Screening Procedure

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Configurationally defined phosphorothioate-containing oligoribonucleotides in the study of the mechanism of cleavage of hammerhead ribozymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Two autolytic processing reactions of a satellite RNA proceed with inversion of configuration

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Identification of the hammerhead ribozyme metal ion binding site responsible for rescue of the deleterious effect of a cleavage site phosphorothioate

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Crystallographic structures of the hammerhead ribozyme: relationship to ribozyme folding and catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

Self-cleaving viroid and newt RNAs may only be active as dimers

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

A small catalytic oligoribonucleotide

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBC.2007.087

21 January 2018

Identifiers

DOI

10.1515/BC.2007.087

1 reference

release_jsgb5247jrfjdgmkhfv362d6tq

24 November 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/jsgb5247jrfjdgmkhfv362d6tq

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference