Unravelling ancient microbial history with community proteogenomics and lipid geochemistry. (Q44940749)

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2 February 2020

review article

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title

Unravelling ancient microbial history with community proteogenomics and lipid geochemistry (English)

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2 February 2020

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1

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2 February 2020

2

Jillian Banfield

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2 February 2020

language of work or name

English

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publication date

1 August 2009

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Nature Reviews Microbiology

2 February 2020

published in

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volume

7

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2 February 2020

issue

8

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page(s)

601-609

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https://scigraph.springernature.com/pub.10.1038/nrmicro2167

2 February 2020

exact match

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cites work

Filamentous microfossils in a 3,235-million-year-old volcanogenic massive sulphide deposit

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Sterols in microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Investigating pathways of diagenetic organic matter sulfurization using compound-specific sulfur isotope analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Biomarker evidence for a major preservation pathway of sedimentary organic carbon.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Massive expansion of marine archaea during a mid-Cretaceous oceanic anoxic event

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Distributional variations in marine crenarchaeotal membrane lipids: a new tool for reconstructing ancient sea water temperatures?

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Environmental precursors to rapid light carbon injection at the Palaeocene/Eocene boundary

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Biomarker evidence for green and purple sulphur bacteria in a stratified Palaeoproterozoic sea.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

The importance of culturing bacterioplankton in the 'omics' age.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Microbial diversity and the genetic nature of microbial species

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Microbiology in the post-genomic era.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Novel hopanoid cyclases from the environment

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

2-Methylhopanoids as biomarkers for cyanobacterial oxygenic photosynthesis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

The dynamic genetic repertoire of microbial communities

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Community structure and metabolism through reconstruction of microbial genomes from the environment

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

A pathway where polyprenyl diphosphate elongates in prenyltransferase. Insight into a common mechanism of chain length determination of prenyltransferases

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Linearly concatenated cyclobutane lipids form a dense bacterial membrane

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Moving-wire device for carbon isotopic analyses of nanogram quantities of nonvolatile organic carbon

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Characterization of a forest soil metagenome clone that confers indirubin and indigo production on Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

An uncultivated crenarchaeota contains functional bacteriochlorophyll a synthase

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Cultivating the uncultivated: a community genomics perspective

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Implications of strain- and species-level sequence divergence for community and isolate shotgun proteomic analysis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Community proteomics of a natural microbial biofilm

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Molecular eco-systems biology: towards an understanding of community function

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Assembling the marine metagenome, one cell at a time

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Systems biology: Functional analysis of natural microbial consortia using community proteomics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Microbial community gene expression in ocean surface waters

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Phylogenetic and biochemical evidence for sterol synthesis in the bacterium Gemmata obscuriglobus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Genetic exchange across a species boundary in the archaeal genus ferroplasma

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

The early history of atmospheric oxygen

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Late-Neoproterozoic deep-ocean oxygenation and the rise of animal life

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

A neoproterozoic snowball earth

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Palaeoproterozoic ice houses and the evolution of oxygen-mediating enzymes: the case for a late origin of photosystem II

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Dating the rise of atmospheric oxygen

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

A whiff of oxygen before the great oxidation event?

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Late Archean biospheric oxygenation and atmospheric evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

The rise of the rhizosolenid diatoms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Three-dimensional preservation of algae and animal embryos in a Neoproterozoic phosphorite

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Fossil steroids record the appearance of Demospongiae during the Cryogenian period

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Eukaryotic organisms in Proterozoic oceans

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

A vaucheriacean alga from the middle Neoproterozoic of Spitsbergen: implications for the evolution of Proterozoic eukaryotes and the Cambrian explosion

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Discoidal impressions and trace-like fossils more than 1200 million years old.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Reassessing the first appearance of eukaryotes and cyanobacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Origin and significance of aromatic hydrocarbons in giant iron ore deposits of the late Archean Hamersley Basin, Western Australia

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Neoarchean biomineralization by benthic cyanobacteria.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Isotopic evidence for microbial sulphate reduction in the early Archaean era.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Microbial fixation of methane carbon at 2.7 Ga: Was an anaerobic mechanism possible?

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Early Archaean microorganisms preferred elemental sulfur, not sulfate

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Evidence from fluid inclusions for microbial methanogenesis in the early Archaean era.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Stromatolites 3,400–3,500 Myr old from the North Pole area, Western Australia

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

13C-Depleted carbon microparticles in >3700-Ma sea-floor sedimentary rocks from west greenland

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Application of tetranucleotide frequencies for the assignment of genomic fragments

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Compositional biases of bacterial genomes and evolutionary implications

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

A Newly Discovered Norisoprenoid, 2,6,15,19-Tetramethylicosane, in Cretaceous Black Shales

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

2,6,10,15,19-Pentamethylicosenes in Methanolobus bombayensis, a marine methanogenic archaeon, and in Methanosarcina mazei

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Biosynthesis of 2-methylbacteriohopanepolyols by an anoxygenic phototroph

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Prokaryotic triterpenoids. 1. 3 beta-Methylhopanoids from Acetobacter species and Methylococcus capsulatus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Steroids and Squalene in Methylococcus capsulatus grown on Methane

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Novel aromatic carotenoid derivatives from sulfur photosynthetic bacteria in sediments

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Chlorobiaceae in Palaeozoic seas revealed by biological markers, isotopes and geology

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Okenane, a biomarker for purple sulfur bacteria (Chromatiaceae), and other new carotenoid derivatives from the 1640Ma Barney Creek Formation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

24-norcholestanes as age-sensitive molecular fossils

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Steroid biosynthesis in prokaryotes: identification of myxobacterial steroids and cloning of the first bacterial 2,3(S)-oxidosqualene cyclase from the myxobacterium Stigmatella aurantiaca

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Variations in the sterane carbon number distributions of marine source rock derived crude oils through geological time

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Sedimentary 12-n-Propylcholestanes, Molecular Fossils Diagnostic of Marine Algae

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Biogeochemical evidence for dinoflagellate ancestors in the early cambrian

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Molecular stratigraphy: a new tool for climatic assessment

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

Evidence for gammacerane as an indicator of water column stratification

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

The molecular fossil record of oleanane and its relation to angiosperms

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2167

The effect of DNA sequence divergence on sexual isolation in Bacillus

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19609261

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12 December 2020

based on heuristic

Functional metagenomics reveals diverse beta-lactamases in a remote Alaskan soil

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19609261

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRMICRO2167

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19609261%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference