Evolutionary dynamics of Newcastle disease virus (Q44985936)

8 December 2017

Evolutionary dynamics of Newcastle disease virus (English)

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8 December 2017

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Newcastle disease virus

object named as

Newcastle disease virus

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based on heuristic

inferred from title

Evolutionary dynamics

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3

Hon S Ip

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8 December 2017

4

Claudio L Afonso

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8 December 2017

Patti J Miller

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PubMed ID

19564032

8 December 2017

L Mia Kim

series ordinal

2

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PubMed ID

19564032

8 December 2017

language of work or name

English

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publication date

28 June 2009

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8 December 2017

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8 December 2017

391

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8 December 2017

1

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8 December 2017

64-72

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Not so fast on recombination analysis of Newcastle disease virus

8 December 2017

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https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.05.033

Characterisation of an antigenically unusual virus responsible for two outbreaks of Newcastle disease in the Republic of Ireland in 1990.

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An exact nonparametric method for inferring mosaic structure in sequence triplets

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Predicting adaptive evolution

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Phylogenetic analysis reveals a low rate of homologous recombination in negative-sense RNA viruses

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BEAST: Bayesian evolutionary analysis by sampling trees

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

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Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences

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Virulent Newcastle disease in Australia: molecular epidemiological analysis of viruses isolated prior to and during the outbreaks of 1998-2000

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A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

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1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.05.033

Identification of a natural multi-recombinant of Newcastle disease virus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2009.05.033

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

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1 reference

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Application of phylogenetic networks in evolutionary studies

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Phylogenetic diversity among low-virulence newcastle disease viruses from waterfowl and shorebirds and comparison of genotype distributions to those of poultry-origin isolates

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Phylogenetics by likelihood: evolutionary modeling as a tool for understanding the genome

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MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

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RDP2: recombination detection and analysis from sequence alignments.

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Structure and function of a paramyxovirus fusion protein

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Biological and phylogenetic characterization of virulent Newcastle disease virus circulating in Mexico

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Mutations in the putative HR-C region of the measles virus F2 glycoprotein modulate syncytium formation

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HyPhy: hypothesis testing using phylogenies

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MODELTEST: testing the model of DNA substitution

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Evaluation of methods for detecting recombination from DNA sequences: computer simulations

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1 reference

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F gene recombination between genotype II and VII Newcastle disease virus

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1 reference

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Pathotypical characterization and molecular epidemiology of Newcastle disease virus isolates from different hosts in China from 1996 to 2005

7 January 2021

1 reference

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The general stochastic model of nucleotide substitution

7 January 2021

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Molecular basis of infectivity and pathogenicity of myxovirus

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Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning

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Genetic recombination during coinfection of two mutants of human respiratory syncytial virus

7 January 2021

1 reference

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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1 reference

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Evolutionary aspects of recombination in RNA viruses

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1 reference

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Maximum likelihood estimation on large phylogenies and analysis of adaptive evolution in human influenza virus A.

7 January 2021

1 reference

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Statistical methods for detecting molecular adaptation

7 January 2021

1 reference

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Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

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1 reference

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Codon-substitution models to detect adaptive evolution that account for heterogeneous selective pressures among site classes

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1 reference

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Widespread adaptive evolution in the human immunodeficiency virus type 1 genome

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1 reference

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10.1016/J.VIROL.2009.05.033

7 January 2021

Identifiers

DOI

1 reference

8 December 2017

1 reference

PubMed ID

19564032