MetalS(3), a database-mining tool for the identification of structurally similar metal sites. (Q45947177)

18 December 2017

title

MetalS(3), a database-mining tool for the identification of structurally similar metal sites. (English)

1 reference

18 December 2017

author

Antonio Rosato

2

1 reference

18 December 2017

Claudia Andreini

4

1 reference

18 December 2017

author name string

Yana Valasatava

1

1 reference

18 December 2017

Gabriele Cavallaro

3

1 reference

18 December 2017

publication date

4 April 2014

1 reference

18 December 2017

Journal of Biological Inorganic Chemistry

published in

1 reference

18 December 2017

volume

19

1 reference

18 December 2017

issue

6

1 reference

18 December 2017

page(s)

937-945

1 reference

18 December 2017

Bioinorganic chemistry in the postgenomic era.

cites work

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

MINAS--a database of Metal Ions in Nucleic AcidS

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

The RCSB Protein Data Bank: redesigned web site and web services

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Metalloproteomes: a bioinformatic approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

A hint to search for metalloproteins in gene banks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Prediction of zinc-binding sites in proteins from sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Minimal functional sites allow a classification of zinc sites in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

MetalS2: a tool for the structural alignment of minimal functional sites in metal-binding proteins and nucleic acids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Structural analysis of metal sites in proteins: non-heme iron sites as a case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Coordination dynamics of zinc in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Cupredoxins--a study of how proteins may evolve to use metals for bioenergetic processes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Copper(I)-mediated protein-protein interactions result from suboptimal interaction surfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

MetalPDB: a database of metal sites in biological macromolecular structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

p3d--Python module for structural bioinformatics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

The Pfam protein families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Pfam: clans, web tools and services

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Structure of fumarate reductase from Wolinella succinogenes at 2.2 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

The X-ray crystal structure of RNA polymerase from Archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

21 January 2018

Archaeal RNA polymerase

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

A gated channel into the proteasome core particle

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

The crystal structure of calcium- and integrin-binding protein 1: insights into redox regulated functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Battle for the EF-hands: magnesium-calcium interference in calmodulin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Structure of the Lassa virus nucleoprotein reveals a dsRNA-specific 3' to 5' exonuclease activity essential for immune suppression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

1.2 Angstroms crystal structure of the S. pneumoniae PhtA histidine triad domain a novel zinc binding fold.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Structural analysis of the H166G site-directed mutant of galactose-1-phosphate uridylyltransferase complexed with either UDP-glucose or UDP-galactose: detailed description of the nucleotide sugar binding site

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Significance of metal ions in galactose-1-phosphate uridylyltransferase: an essential structural zinc and a nonessential structural iron

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Conformational Flexibility of the Dengue Virus RNA-Dependent RNA Polymerase Revealed by a Complex with an Inhibitor

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Crystal Structure of the Dengue Virus RNA-Dependent RNA Polymerase Catalytic Domain at 1.85-Angstrom Resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Structure of a receptor-binding fragment of reelin and mutational analysis reveal a recognition mechanism similar to endocytic receptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Structural basis for specific recognition of reelin by its receptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

The Zur-regulated ZinT protein is an auxiliary component of the high-affinity ZnuABC zinc transporter that facilitates metal recruitment during severe zinc shortage

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

The Salmonella enterica ZinT structure, zinc affinity and interaction with the high-affinity uptake protein ZnuA provide insight into the management of periplasmic zinc

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

YodA from Escherichia coli is a metal-binding, lipocalin-like protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Cyclolization of D-lysergic acid alkaloid peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Crystallographic studies on the reaction of isopenicillin N synthase with an unsaturated substrate analogue

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Crystal structure of isopenicillin N synthase is the first from a new structural family of enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Dali: a network tool for protein structure comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

5-Carboxy-8-hydroxyquinoline is a Broad Spectrum 2-Oxoglutarate Oxygenase Inhibitor which Causes Iron Translocation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

Characterisation of the MMP-12-Elastin Adduct

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00775-014-1128-3

10.1007/S00775-014-1128-3

21 January 2018

Identifiers

DOI

1 reference

18 December 2017

Dimensions Publication ID

1049574627

0 references

1 reference

18 December 2017