Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. (Q45978074)

18 December 2017

title

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. (English)

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18 December 2017

author

Blake Meyers

1

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18 December 2017

author name string

Alexander Kozik

2

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18 December 2017

Alyssa Griego

3

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18 December 2017

Hanhui Kuang

4

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18 December 2017

Richard W Michelmore

5

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18 December 2017

publication date

1 April 2003

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18 December 2017

published in

The Plant Cell

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18 December 2017

volume

15

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18 December 2017

issue

4

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18 December 2017

page(s)

809-834

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18 December 2017

Mutational analysis of the Arabidopsis nucleotide binding site-leucine-rich repeat resistance gene RPS2.

cites work

1 reference

12 December 2020

Isolation of a superfamily of candidate disease-resistance genes in soybean based on a conserved nucleotide-binding site

1 reference

12 December 2020

Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily

1 reference

12 December 2020

Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis.

1 reference

12 December 2020

The domains of death: evolution of the apoptosis machinery

1 reference

12 December 2020

MyD88 is an adaptor protein in the hToll/IL-1 receptor family signaling pathways

1 reference

12 December 2020

Mosaic organization of orthologous sequences in grass genomes

1 reference

12 December 2020

Arabidopsis RPP4 is a member of the RPP5 multigene family of TIR-NB-LRR genes and confers downy mildew resistance through multiple signalling components

1 reference

12 December 2020

Resistance to Ralstonia solanacearum in Arabidopsis thaliana is conferred by the recessive RRS1-R gene, a member of a novel family of resistance genes

1 reference

12 December 2020

T-Coffee: A novel method for fast and accurate multiple sequence alignment

1 reference

12 December 2020

Dm3 is one member of a large constitutively expressed family of nucleotide binding site-leucine-rich repeat encoding genes

1 reference

12 December 2020

Downy mildew (Peronospora parasitica) resistance genes in Arabidopsis vary in functional requirements for NDR1, EDS1, NPR1 and salicylic acid accumulation.

1 reference

12 December 2020

Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process

1 reference

12 December 2020

Phylogeny and genomic organization of the TIR and non-tIR NBS-LRR resistance gene family in Medicago truncatula

1 reference

12 December 2020

Genes controlling expression of defense responses in Arabidopsis--2001 status

1 reference

12 December 2020

Identification of resistance gene analogs linked to a powdery mildew resistance locus in grapevine.

1 reference

12 December 2020

Death Don't Have No Mercy: Cell Death Programs in Plant-Microbe Interactions

1 reference

12 December 2020

Patterns of positive selection in the complete NBS-LRR gene family of Arabidopsis thaliana.

1 reference

12 December 2020

Expression of the Bs2 pepper gene confers resistance to bacterial spot disease in tomato

1 reference

12 December 2020

The hidden duplication past of Arabidopsis thaliana

1 reference

12 December 2020

The functions and consensus motifs of nine types of peptide segments that form different types of nucleotide-binding sites

1 reference

12 December 2020

1 reference

12 December 2020

A mutation within the leucine-rich repeat domain of the Arabidopsis disease resistance gene RPS5 partially suppresses multiple bacterial and downy mildew resistance genes

1 reference

12 December 2020

Rapid reorganization of resistance gene homologues in cereal genomes.

1 reference

12 December 2020

Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance

1 reference

12 December 2020

Evidence for a role of the N terminus and leucine-rich repeat region of the Mi gene product in regulation of localized cell death

1 reference

12 December 2020

The arms race is ancient history in Arabidopsis, the wildflower

1 reference

12 December 2020

Xa21D encodes a receptor-like molecule with a leucine-rich repeat domain that determines race-specific recognition and is subject to adaptive evolution

1 reference

12 December 2020

Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes.

1 reference

12 December 2020

The Arabidopsis RPS4 bacterial-resistance gene is a member of the TIR-NBS-LRR family of disease-resistance genes.

1 reference

12 December 2020

The major resistance gene cluster in lettuce is highly duplicated and spans several megabases

1 reference

12 December 2020

CARD15 mutations in Blau syndrome

1 reference

12 December 2020

Identification of R-gene homologous DNA fragments genetically linked to disease resistance loci in Arabidopsis thaliana

1 reference

12 December 2020

The Arabidopsis RRS1-R disease resistance gene--uncovering the plant's nucleus as the new battlefield of plant defense?

1 reference

12 December 2020

SMART, a simple modular architecture research tool: identification of signaling domains

1 reference

12 December 2020

Receptor-like genes in the major resistance locus of lettuce are subject to divergent selection

1 reference

12 December 2020

The NACHT family - a new group of predicted NTPases implicated in apoptosis and MHC transcription activation

1 reference

12 December 2020

Broad-spectrum mildew resistance in Arabidopsis thaliana mediated by RPW8.

1 reference

12 December 2020

The Toll-receptor family and control of innate immunity

1 reference

12 December 2020

Pfam: a comprehensive database of protein domain families based on seed alignments

1 reference

12 December 2020

The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistance specificity to Blumeria graminis f. sp. hordei in barley and wheat.

1 reference

12 December 2020

Epigenetic variation in Arabidopsis disease resistance

1 reference

12 December 2020

Regions outside of the leucine-rich repeats of flax rust resistance proteins play a role in specificity determination.

1 reference

12 December 2020

Mutation of a new gene encoding a putative pyrin-like protein causes familial cold autoinflammatory syndrome and Muckle-Wells syndrome

1 reference

12 December 2020

A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease

1 reference

12 December 2020

Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging.

1 reference

12 December 2020

Plant pathogens and integrated defence responses to infection

1 reference

12 December 2020

Mode of amplification and reorganization of resistance genes during recent Arabidopsis thaliana evolution

1 reference

12 December 2020

Resistance gene-dependent plant defense responses

1 reference

12 December 2020

Novel disease resistance specificities result from sequence exchange between tandemly repeated genes at the Cf-4/9 locus of tomato.

1 reference

12 December 2020

Signaling in plant-microbe interactions

1 reference

12 December 2020

Constitutive gain-of-function mutants in a nucleotide binding site-leucine rich repeat protein encoded at the Rx locus of potato

1 reference

12 December 2020

Full-length messenger RNA sequences greatly improve genome annotation

1 reference

12 December 2020

The root knot nematode resistance gene Mi from tomato is a member of the leucine zipper, nucleotide binding, leucine-rich repeat family of plant genes

1 reference

12 December 2020

Interaction between domains of a plant NBS-LRR protein in disease resistance-related cell death.

1 reference

12 December 2020

Resistance gene candidates identified by PCR with degenerate oligonucleotide primers map to clusters of resistance genes in lettuce

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12 December 2020

The NOD: a signaling module that regulates apoptosis and host defense against pathogens

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12 December 2020

Recombination and spontaneous mutation at the major cluster of resistance genes in lettuce (Lactuca sativa).

1 reference

12 December 2020

Diversity in nucleotide binding site-leucine-rich repeat genes in cereals

1 reference

12 December 2020

Profile hidden Markov models

1 reference

12 December 2020

The GTPase superfamily: conserved structure and molecular mechanism

1 reference

12 December 2020

Mal (MyD88-adapter-like) is required for Toll-like receptor-4 signal transduction

1 reference

12 December 2020

The origins of genomic duplications in Arabidopsis.

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12 December 2020

TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes

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12 December 2020

Map-based cloning of a protein kinase gene conferring disease resistance in tomato

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12 December 2020

Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance

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12 December 2020

Members of the Arabidopsis HRT/RPP8 family of resistance genes confer resistance to both viral and oomycete pathogens

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12 December 2020

Plant Disease Resistance Genes: Function Meets Structure

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12 December 2020

The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistance gene N.

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12 December 2020

Coiled coils: a highly versatile protein folding motif

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12 December 2020

Resistance gene complexes: evolution and utilization

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12 December 2020

Identification of regions in alleles of the flax rust resistance gene L that determine differences in gene-for-gene specificity.

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12 December 2020

The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals

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12 December 2020

Methods and statistics for combining motif match scores

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12 December 2020

The value of prior knowledge in discovering motifs with MEME

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12 December 2020

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

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12 December 2020

Three genes of the Arabidopsis RPP1 complex resistance locus recognize distinct Peronospora parasitica avirulence determinants.

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12 December 2020

Large-scale structure-function analysis of the Arabidopsis RPM1 disease resistance protein

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12 December 2020

Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease

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12 December 2020

GenomePixelizer--a visualization program for comparative genomics within and between species

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12 December 2020

Sequence architecture downstream of the initiator codon enhances gene expression and protein stability in plants

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12 December 2020

Six Amino Acid Changes Confined to the Leucine-Rich Repeat beta-Strand/beta-Turn Motif Determine the Difference between the P and P2 Rust Resistance Specificities in Flax

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12 December 2020

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

12 December 2020

Arabidopsis SGT1b is required for defense signaling conferred by several downy mildew resistance genes

1 reference

12 December 2020

A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21

1 reference

12 December 2020

RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes

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12 December 2020

Diversity, distribution, and ancient taxonomic relationships within the TIR and non-TIR NBS-LRR resistance gene subfamilies

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12 December 2020

The Pfam protein families database

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12 December 2020

The P-loop--a common motif in ATP- and GTP-binding proteins

1 reference

12 December 2020

Origin, diversity and evolution of NBS-type disease-resistance gene homologues in coffee trees (Coffea L.).

1 reference

12 December 2020

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

12 December 2020

Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles.

1 reference

12 December 2020

Regulatory Role of SGT1 in Early R Gene-Mediated Plant Defenses

1 reference

12 December 2020

Resistance gene analogs are conserved and clustered in soybean

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12 December 2020

PYPAF7, a novel PYRIN-containing Apaf1-like protein that regulates activation of NF-kappa B and caspase-1-dependent cytokine processing

1 reference

12 December 2020

Inactivation of the flax rust resistance gene M associated with loss of a repeated unit within the leucine-rich repeat coding region.

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12 December 2020

The isolation and mapping of disease resistance gene analogs in maize

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12 December 2020

Speculations on RNA splicing

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12 December 2020

Hypersensitive response-related death

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12 December 2020

Role of cytochrome c and dATP/ATP hydrolysis in Apaf-1-mediated caspase-9 activation and apoptosis

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12 December 2020

Association of intron phases with conservation at splice site sequences and evolution of spliceosomal introns

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12 December 2020

Intragenic recombination and diversifying selection contribute to the evolution of downy mildew resistance at the RPP8 locus of Arabidopsis.

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12 December 2020

Disease resistance gene homologs correlate with disease resistance loci of Arabidopsis thaliana

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12 December 2020

Plant disease-resistance proteins and the gene-for-gene concept

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12 December 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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12 December 2020

Nods: a family of cytosolic proteins that regulate the host response to pathogens

1 reference

12 December 2020

Predicting coiled coils from protein sequences

1 reference

12 December 2020

The tomato R gene products I-2 and MI-1 are functional ATP binding proteins with ATPase activity.

1 reference

12 December 2020

The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor

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12 December 2020

Identifiers

DOI

10.1105/TPC.009308

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18 December 2017

PubMed ID

12671079

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18 December 2017