ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae (Q47621279)

4 February 2018

title

ITS secondary structure derived from comparative analysis: implications for sequence alignment and phylogeny of the Asteraceae (English)

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4 February 2018

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1

Leslie R Goertzen

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4 February 2018

Jamie J Cannone

2

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4 February 2018

Robin R Gutell

series ordinal

3

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4 February 2018

Robert K Jansen

series ordinal

4

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4 February 2018

publication date

1 November 2003

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4 February 2018

Molecular Phylogenetics and Evolution

published in

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4 February 2018

volume

29

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4 February 2018

issue

2

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4 February 2018

page(s)

216-234

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4 February 2018

The its Region of Nuclear Ribosomal DNA: A Valuable Source of Evidence on Angiosperm Phylogeny

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Tribal Phylogeny of the Asteraceae Based on Two Non-Coding Chloroplast Sequences, the trnL Intron and trnL/trnF Intergenic Spacer

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Derivation of the Secondary Structure of the ITS-1 Transcript in Volvocales and its Taxonomic Correlations

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Increased congruence does not necessarily indicate increased phylogenetic accuracy--the behavior of the incongruence length difference test in mixed-model analyses

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Phylogenetic placement and circumscription of tribes Inuleae s. str. and Plucheeae (Asteraceae): evidence from sequences of chloroplast gene ndhF.

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The Systematic Position of the Blepharispermum Group (Asteraceae, Heliantheae)

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Testing Significance of Incongruence

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Molecular Systematics of the Asteriscus Alliance (Asteraceae: Inuleae) I: Evidence from the Internal Transcribed Spacers of Nuclear Ribosomal DNA

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Tribal and Subtribal Delimitation and Phylogeny of the Cardueae (Asteraceae): A Combined Nuclear and Chloroplast DNA Analysis

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Identification of base-triples in RNA using comparative sequence analysis.

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Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods

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7 January 2021

The accuracy of ribosomal RNA comparative structure models

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Deep-level diagnostic value of the rDNA-ITS region

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Conservation patterns in angiosperm rDNA ITS2 sequences

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A chloroplast DNA inversion marks an ancient evolutionary split in the sunflower family (Asteraceae)

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Phylogeny and Character Evolution in the Asteraceae Based on Chloroplast DNA Restriction Site Mapping

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7 January 2021

Ribosomal internal transcribed spacer 2 (ITS2) exhibits a common core of secondary structure in vertebrates and yeast

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7 January 2021

Molecular evidence for an African origin of the Hawaiian endemic Hesperomannia (Asteraceae)

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7 January 2021

ndhF sequence evolution and the major clades in the sunflower family

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7 January 2021

Phylogenetic Implications of rbcL and ITS Sequence Variation in the Berberidaceae

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7 January 2021

Conserved core structure in the internal transcribed spacer 1 of the Schizosaccharomyces pombe precursor ribosomal RNA

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7 January 2021

Structural equivalence in the transcribed spacers of pre-rRNA transcripts in Schizosaccharomyces pombe

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7 January 2021

Ribosomal RNA maturation in Schizosaccharomyces pombe is dependent on a large ribonucleoprotein complex of the internal transcribed spacer 1.

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7 January 2021

A conserved sequence in internal transcribed spacer 1 of plant nuclear rRNA genes

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7 January 2021

The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants

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7 January 2021

Evolutionarily conserved structural features in the ITS2 of mammalian pre-rRNAs and potential interactions with the snoRNA U8 detected by comparative analysis of new mouse sequences

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7 January 2021

Trematode and monogenean rRNA ITS2 secondary structures support a four-domain model

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7 January 2021

Birth of the snoRNPs: the evolution of RNase MRP and the eukaryotic pre-rRNA-processing system

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7 January 2021

The Parsimony Ratchet, a New Method for Rapid Parsimony Analysis

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7 January 2021

Secondary structure model for 23S ribosomal RNA.

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7 January 2021

The structure of the ITS2-proximal stem is required for pre-rRNA processing in yeast

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7 January 2021

Phylogenetic relationships inferred from the sequence and secondary structure of ITS1 rRNA in Albinaria and putative Isabellaria species (Gastropoda, Pulmonata, Clausiliidae).

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7 January 2021

Comprehensive comparison of structural characteristics in eukaryotic cytoplasmic large subunit (23 S-like) ribosomal RNA.

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7 January 2021

A chloroplast group I intron undergoes the first step of reverse splicing into host cytoplasmic 5.8 S rRNA. Implications for intron-mediated RNA recombination, intron transposition and 5.8 S rRNA structure

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7 January 2021

Evolutionarily Conserved Structural Elements are Critical for Processing of Internal Transcribed Spacer 2 fromSaccharomyces cerevisiaePrecursor Ribosomal RNA

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7 January 2021

Separate structural elements within internal transcribed spacer 1 of Saccharomyces cerevisiae precursor ribosomal RNA direct the formation of 17S and 26S rRNA.

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7 January 2021

A conserved core structure in the 18?25S rRNA intergenic region from tobacco, Nicotiana rustica

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7 January 2021

Structure of the 30S ribosomal subunit

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7 January 2021

Failure of the ILD to determine data combinability for slow loris phylogeny

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7 January 2021

Computer prediction of RNA structure

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7 January 2021

On finding all suboptimal foldings of an RNA molecule

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7 January 2021

10.1016/S1055-7903(03)00094-0

Identifiers

DOI

1 reference

4 February 2018

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4 February 2018