In vivo formaldehyde cross-linking: it is time for black box analysis. (Q51508311)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25241225%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

title

In vivo formaldehyde cross-linking: it is time for black box analysis (English)

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16 February 2020

2

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16 February 2020

Alexey Gavrilov

series ordinal

1

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16 February 2020

author name string

Giacomo Cavalli

series ordinal

3

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16 February 2020

publication date

19 September 2014

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Briefings in functional genomics

16 February 2020

published in

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16 February 2020

volume

14

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16 February 2020

issue

2

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16 February 2020

page(s)

163-165

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Creative Commons Attribution 4.0 International

16 February 2020

copyright license

start time

2 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast

1 reference

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Chromatin immunoprecipitation indirect peaks highlight long-range interactions of insulator proteins and Pol II pausing.

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Quantitative analysis of genomic element interactions by molecular colony technique.

29 September 2018

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Organization of the mitotic chromosome

29 September 2018

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Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

29 September 2018

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Disclosure of a structural milieu for the proximity ligation reveals the elusive nature of an active chromatin hub.

29 September 2018

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The long-range interaction landscape of gene promoters

29 September 2018

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Anterior-posterior differences in HoxD chromatin topology in limb development

29 September 2018

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Advancing formaldehyde cross-linking towards quantitative proteomic applications

29 September 2018

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Chromatin composition is changed by poly(ADP-ribosyl)ation during chromatin immunoprecipitation

29 September 2018

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A decade of 3C technologies: insights into nuclear organization

29 September 2018

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A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber

29 September 2018

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A temporal threshold for formaldehyde crosslinking and fixation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6090872

In vivo dual cross-linking for identification of indirect DNA-associated proteins by chromatin immunoprecipitation.

29 September 2018

1 reference

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Two-step cross-linking method for identification of NF-kappaB gene network by chromatin immunoprecipitation.

29 September 2018

1 reference

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Genome-wide binding map of the histone deacetylase Rpd3 in yeast

29 September 2018

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Capturing chromosome conformation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6090872

Analysis of chromatin structure by in vivo formaldehyde cross-linking.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6090872

Formaldehyde-mediated DNA-protein crosslinking: a probe for in vivo chromatin structures

29 September 2018

1 reference

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Change in the pattern of histone binding to DNA upon transcriptional activation.

29 September 2018

1 reference

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29 September 2018

Identifiers

DOI

10.1093/BFGP/ELU037

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25241225%20AND%20SRC:MED&resulttype=core&format=json

release_27hbaokpffaarjqwohucwfsbq4

16 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/27hbaokpffaarjqwohucwfsbq4

mapped directly with Wikidata item

24 November 2022

based on heuristic

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16 February 2020

PubMed publication ID

25241225

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25241225%20AND%20SRC:MED&resulttype=core&format=json