Strengthening the reporting of genetic association studies (STREGA): an extension of the STROBE statement (Q56565716)

Jean Golding

19

0 references

Jeremy Grimshaw

Jeremy Grimshaw

10

0 references

John Ioannidis

3

John P A Ioannidis

0 references

Isabel Fortier

24

Isabel Fortier

0 references

David Moher

4

David Moher

0 references

Marta Gwinn

12

Marta Gwinn

0 references

Muin J. Khoury

7

Muin J Khoury

0 references

Julian Little

1

Julian Little

0 references

Cornelia M. van Duijn

20

Cornelia van Duijn

0 references

Julian Higgins

2

Julian P T Higgins

0 references

George Davey Smith

9

George Davey-Smith

0 references

Claire Infante-Rivard

28

Claire Infante-Rivard

0 references

George Wells

23

George Wells

0 references

Candice Y. Johnson

16

Candice Y Johnson

0 references

Guang Yong Zou

14

Guang Yong Zou

0 references

Kim Hutchings

15

Kim Hutchings

0 references

Valerie Tait

17

Valerie Tait

0 references

Matthew L Freedman

25

Matthew Freedman

0 references

Maja Zecevic

26

Maja Zecevic

0 references

Nick Birkett

30

Nick Birkett

0 references

author name string

France Gagnon

5

0 references

Barbara Cohen

8

0 references

Paul Scheet

11

0 references

Robin E Williamson

13

0 references

Miriam Wiens

18

0 references

John McLaughlin

21

0 references

Richard King

27

0 references

Alex Stewart

29

0 references

Andrew Paterson

European Journal of Epidemiology

22

0 references

language of work or name

English

0 references

publication date

3 February 2009

5 references

20 June 2019

22 June 2019

19 September 2019

6 January 2020

18 October 2020

5 references

20 June 2019

22 June 2019

19 September 2019

6 January 2020

18 October 2020

24

0 references

issue

1

0 references

page(s)

37-55

0 references

exact match

https://scigraph.springernature.com/pub.10.1007/s10654-008-9302-y

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Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

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Strengthening the Reporting of Observational Studies in Epidemiology (STROBE): explanation and elaboration.

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The revised CONSORT statement for reporting randomized trials: explanation and elaboration

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Does haplotype diversity predict power for association mapping of disease susceptibility?

21 January 2018

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Publication guidelines for improvement studies in health care: evolution of the SQUIRE Project

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Race and ethnicity in medical research: requirements meet reality.

21 January 2018

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Outcome reporting bias in randomized trials funded by the Canadian Institutes of Health Research

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Missing data imputation and haplotype phase inference for genome-wide association studies

21 January 2018

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Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays

29 September 2018

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Reporting of human genome epidemiology (HuGE) association studies: an empirical assessment

29 September 2018

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Genome-wide association studies for complex traits: consensus, uncertainty and challenges

29 September 2018

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How to interpret a genome-wide association study

29 September 2018

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A second generation human haplotype map of over 3.1 million SNPs

29 September 2018

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The Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) statement: guidelines for reporting observational studies

29 September 2018

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Mendelian proportions in a mixed population

29 September 2018

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Imputation-based analysis of association studies: candidate regions and quantitative traits

29 September 2018

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Genome-wide association scan shows genetic variants in the FTO gene are associated with obesity-related traits

29 September 2018

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Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24.

29 September 2018

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A common genetic risk factor for colorectal and prostate cancer

29 September 2018

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A new multipoint method for genome-wide association studies by imputation of genotypes

29 September 2018

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Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

29 September 2018

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Replicating genotype-phenotype associations

29 September 2018

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Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility

29 September 2018

1 reference

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Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes

29 September 2018

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Non-replication and inconsistency in the genome-wide association setting

29 September 2018

1 reference

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Common variants on chromosomes 2q35 and 16q12 confer susceptibility to estrogen receptor-positive breast cancer

29 September 2018

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A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer

29 September 2018

1 reference

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Genome-wide association study identifies novel breast cancer susceptibility loci

29 September 2018

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A method to address differential bias in genotyping in large-scale association studies

29 September 2018

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A common allele on chromosome 9 associated with coronary heart disease

29 September 2018

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A common variant on chromosome 9p21 affects the risk of myocardial infarction

29 September 2018

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Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes

29 September 2018

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A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants

29 September 2018

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Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels

29 September 2018

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Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4

29 September 2018

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Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis

29 September 2018

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Multiple regions within 8q24 independently affect risk for prostate cancer

29 September 2018

1 reference

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Genome-wide association study of prostate cancer identifies a second risk locus at 8q24

29 September 2018

1 reference

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Bias in psychiatric case-control studies: literature survey

29 September 2018

1 reference

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On the synthesis and interpretation of consistent but weak gene-disease associations in the era of genome-wide association studies

29 September 2018

1 reference

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A genome-wide association study identifies IL23R as an inflammatory bowel disease gene

29 September 2018

1 reference

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The merits of testing Hardy-Weinberg equilibrium in the analysis of unmatched case-control data: a cautionary note

29 September 2018

1 reference

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A tutorial on statistical methods for population association studies

29 September 2018

1 reference

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A systematic review of the quality of genetic association studies in human sepsis

29 September 2018

1 reference

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Case-control genetic association studies in gastrointestinal disease: review and recommendations.

29 September 2018

1 reference

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Tracking the epidemiology of human genes in the literature: the HuGE Published Literature database

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase

29 September 2018

1 reference

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A road map for efficient and reliable human genome epidemiology

29 September 2018

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Bias in clinical intervention research.

29 September 2018

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Genotyping errors: causes, consequences and solutions

29 September 2018

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Population structure, differential bias and genomic control in a large-scale, case-control association study

29 September 2018

1 reference

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Adjusting for treatment effects in studies of quantitative traits: antihypertensive therapy and systolic blood pressure.

29 September 2018

1 reference

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Confounding from cryptic relatedness in case-control association studies

29 September 2018

1 reference

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Prospects and pitfalls in whole genome association studies

29 September 2018

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Reliability of statistical associations between genes and disease

29 September 2018

1 reference

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Guidelines for conducting and reporting whole genome/large-scale association studies.

29 September 2018

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A network of investigator networks in human genome epidemiology

29 September 2018

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Publication policy or publication bias?

29 September 2018

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Genetic association studies: time for a new paradigm?

29 September 2018

1 reference

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Genetic association studies in Thorax

29 September 2018

1 reference

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Assessing the quality of case-control association studies on the genetic basis of sepsis

29 September 2018

1 reference

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Nonreplication in genetic studies of complex diseases--lessons learned from studies of osteoporosis and tentative remedies

29 September 2018

1 reference

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Identifying outcome reporting bias in randomised trials on PubMed: review of publications and survey of authors

29 September 2018

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GERBIL: Genotype resolution and block identification using likelihood

29 September 2018

1 reference

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'Racial' differences in genetic effects for complex diseases

29 September 2018

1 reference

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Genetic association studies in epilepsy: "the truth is out there".

29 September 2018

1 reference

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The scandal of poor epidemiological research

29 September 2018

1 reference

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Issues in the reporting of epidemiological studies: a survey of recent practice

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Robustness of case-control studies of genetic factors to population stratification: magnitude of bias and type I error.

29 September 2018

1 reference

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Model-based inference of haplotype block variation.

29 September 2018

1 reference

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Jesting Pilate, genetic case-control association studies, and Heart

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Associations, populations, and the truth: recommendations for genetic association studies in Arthritis & Rheumatism

29 September 2018

1 reference

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Large-scale single-nucleotide polymorphism (SNP) and haplotype analyses, using dense SNP Maps, of 199 drug-related genes in 752 subjects: the analysis of the association between uncommon SNPs within haplotype blocks and the haplotypes constructed wi

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Evaluating bias due to population stratification in case-control association studies of admixed populations.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Empirical evidence for selective reporting of outcomes in randomized trials: comparison of protocols to published articles

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Candidate gene approach in association studies: would the factor V Leiden mutation have been found by this approach?

29 September 2018

1 reference

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The effects of human population structure on large genetic association studies

29 September 2018

1 reference

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Assessing the impact of population stratification on genetic association studies

29 September 2018

1 reference

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Estimation of magnitude in gene-environment interactions in the presence of measurement error.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Detection of genotyping errors by Hardy-Weinberg equilibrium testing.

29 September 2018

1 reference

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The impact of SNP density on fine-scale patterns of linkage disequilibrium

29 September 2018

1 reference

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Genetic association studies in Alzheimer's disease research: challenges and opportunities

29 September 2018

1 reference

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Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Methodologic quality and genotyping reproducibility in studies of tumor necrosis factor -308 G-->A single nucleotide polymorphism and bacterial sepsis: implications for studies of complex traits

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

A method for the assessment of disease associations with single-nucleotide polymorphism haplotypes and environmental variables in case-control studies

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Problems of reporting genetic associations with complex outcomes

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Using haplotype blocks to map human complex trait loci

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Population stratification and spurious allelic association

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Undetected genotyping errors cause apparent overtransmission of common alleles in the transmission/disequilibrium test

29 September 2018

1 reference

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Partition-ligation-expectation-maximization algorithm for haplotype inference with single-nucleotide polymorphisms

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

The design, execution, and interpretation of genetic association studies to decipher complex diseases.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Joint effect of genes and environment distorted by selection biases: implications for hospital-based case-control studies.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

CYP3A4-V and prostate cancer in African Americans: causal or confounding association because of population stratification?

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Testing for population subdivision and association in four case-control studies

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Point: population stratification: a problem for case-control studies of candidate-gene associations?

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Guidelines for human gene nomenclature

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Proposed guidelines for papers describing DNA polymorphism-disease associations.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Genew: the human gene nomenclature database

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

The effect that genotyping errors have on the robustness of common linkage-disequilibrium measures

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Evaluation of candidate genes in case-control studies: a statistical method to account for related subjects

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

The CONSORT statement: revised recommendations for improving the quality of reports of parallel-group randomized trials

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

A New Statistical Method for Haplotype Reconstruction from Population Data

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Association study designs for complex diseases

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Re: Population stratification in epidemiologic studies of common genetic variants and cancer: quantification of bias

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

dbSNP: the NCBI database of genetic variation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Estimation of pairwise relatedness with molecular markers.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Measuring departures from Hardy-Weinberg: a Markov chain Monte Carlo method for estimating the inbreeding coefficient.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

A Bayesian characterization of Hardy-Weinberg disequilibrium

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Recommendations for a nomenclature system for human gene mutations. Nomenclature Working Group.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Misclassification of genetic susceptibility biomarkers: implications for case-control studies and cross-population comparisons.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

The A1 allele at the D2 dopamine receptor gene and alcoholism. A reappraisal

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Use of methodological standards in diagnostic test research. Getting better but still not good.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Gm3;5,13,14 and type 2 diabetes mellitus: an association in American Indians with genetic admixture

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Case-control association studies in pharmacogenetics

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Turning the Pump Handle: Evolving Methods for Integrating the Evidence on Gene-Disease Association

2 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Two variants on chromosome 17 confer prostate cancer risk and the one in TCF2 protects against type 2 diabetes

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Impact of Violations and Deviations in Hardy-Weinberg Equilibrium on Postulated Gene-Disease Associations

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

The Reliable Identification of Disease-Gene Associations

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Hardy–Weinberg equilibrium in genetic association studies: an empirical evaluation of reporting, deviations and power

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Quality control in molecular genetic testing

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2764094

Are we ready for genome-wide association studies?

30 November 2018

1 reference

12 December 2020

Clinical epidemiological quality in molecular genetic research: the need for methodological standards

1 reference

12 December 2020

The human genome project is complete. How do we develop a handle for the pump?

1 reference

12 December 2020

Comparison of strategies for selecting single nucleotide polymorphisms for case/control association studies

1 reference

12 December 2020

Framework for a fully powered risk engine

1 reference

12 December 2020

How should we use information about HWE in the meta-analyses of genetic association studies?

1 reference

12 December 2020

Protecting aggregate genomic data

1 reference

12 December 2020

What makes a good genetic association study?

1 reference

12 December 2020

1 reference

12 December 2020

Good prospects for genetic and molecular epidemiologic studies in the European Journal of Epidemiology

1 reference

12 December 2020

Elaboración de directrices para la publicación de investigación biomédica: proceso y fundamento científico

1 reference

12 December 2020

Positive results in association studies are associated with departure from Hardy-Weinberg equilibrium: hint for genotyping error?

1 reference

12 December 2020

Publication environment and broad investigation of the genome

1 reference

12 December 2020

SNP judgments and freedom of association

1 reference

12 December 2020

Genetic variation and cancer: improving the environment for publication of association studies

1 reference

12 December 2020

An empirical evaluation of multifarious outcomes in pharmacogenetics: beta-2 adrenoceptor gene polymorphisms in asthma treatment

1 reference

12 December 2020

Recommendations for Reporting of Clinical Research Studies

1 reference

12 December 2020

Population stratification in epidemiologic studies of common genetic variants and cancer: quantification of bias

1 reference

12 December 2020

Guidelines for association studies in Human Molecular Genetics

1 reference

12 December 2020

Reflections on publication criteria for genetic association studies

1 reference

12 December 2020