AQUA: automated quality improvement for multiple sequence alignments (Q56918039)

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12 February 2020

title

AQUA: automated quality improvement for multiple sequence alignments (English)

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12 February 2020

0 references

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1

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12 February 2020

Christopher J. Creevey

series ordinal

2

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12 February 2020

Peer Bork

series ordinal

5

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4

Detlev Arendt

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12 February 2020

author name string

Julie D Thompson

series ordinal

3

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12 February 2020

language of work or name

English

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publication date

19 November 2009

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12 February 2020

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12 February 2020

volume

26

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12 February 2020

issue

2

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12 February 2020

page(s)

263-265

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Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee

12 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

Refining multiple sequence alignments with conserved core regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

ProbCons: Probabilistic consistency-based multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

Broad phylogenomic sampling improves resolution of the animal tree of life

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

eggNOG: automated construction and annotation of orthologous groups of genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

Recent developments in the MAFFT multiple sequence alignment program

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

Automatic assessment of alignment quality

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

3DCoffee: combining protein sequences and structures within multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

The meaning of alignment: lessons from structural diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

PRALINE: a multiple sequence alignment toolbox that integrates homology-extended and secondary structure information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

A comprehensive comparison of multiple sequence alignment programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

RASCAL: rapid scanning and correction of multiple sequence alignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP651

10.1093/BIOINFORMATICS/BTP651

21 January 2018

Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19926669%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/MullerCTAB10

12 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference