Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T) (Q57179927)

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English	Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T)	No description defined

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scholarly article

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Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T) (English)

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whole genome sequencing

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based on heuristic

inferred from title

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based on heuristic

inferred from title

object named as

Cliff Han

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object named as

Markus Göker

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object named as

Sam Pitluck

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Natalia N. Ivanova

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object named as

Natalia Ivanova

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Nikos C. Kyrpides

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object named as

Nikos C. Kyrpides

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object named as

Tanja Woyke

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object named as

Loren Hauser

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object named as

Susan Lucas

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Cynthia D Jeffries

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object named as

Cynthia D. Jeffries

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object named as

Hope Tice

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object named as

John C. Detter

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Hans-Peter Klenk

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object named as

Hans-Peter Klenk

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object named as

Alex Copeland

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object named as

David Bruce

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Scott A. Beatson

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object named as

Scott Beatson

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Nancy Hammon

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Karen W Davenport

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object named as

Karen Davenport

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object named as

Miriam Land

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Roxanne Tapia

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object named as

Eileen Dalin

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Kerrie W. Berry

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object named as

Kerrie W. Berry

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object named as

Ulrike Kappler

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Tijana Glavina Del Rio

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object named as

Tijana Glavina Del Rio

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Lynne A. Goodwin

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object named as

Lynne A. Goodwin

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author name string

Alla Lapidus

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Paul Richardson

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Yun-juan Chang

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publication date

26 September 2012

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Standards in genomic sciences

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7

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1

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44-58

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Proposal for the reclassification of Thiobacillus novellus as Starkeya novella gen. nov., comb. nov., in the alpha-subclass of the Proteobacteria

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Starkeya koreensis sp. nov., isolated from rice straw

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Approved Lists of Bacterial Names

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Carbon dioxide fixation and carboxydismutase in Thiobacillusnovellus

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Evidence for two pathways of thiosulfate oxidation in Starkeya novella (formerly Thiobacillus novellus).

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Sulfite:Cytochrome c oxidoreductase from Thiobacillus novellus. Purification, characterization, and molecular biology of a heterodimeric member of the sulfite oxidase family

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Molecular basis of intramolecular electron transfer in sulfite-oxidizing enzymes is revealed by high resolution structure of a heterodimeric complex of the catalytic molybdopterin subunit and a c-type cytochrome subunit

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Kinetic and structural evidence for the importance of Tyr236 for the integrity of the Mo active site in a bacterial sulfite dehydrogenase.

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Molecular Basis for Enzymatic Sulfite Oxidation: HOW THREE CONSERVED ACTIVE SITE RESIDUES SHAPE ENZYME ACTIVITY

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Basic local alignment search tool

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

An algorithm for suffix stripping

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Multiple sequence alignment using partial order graphs

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https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

A rapid bootstrap algorithm for the RAxML Web servers

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Spha

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

The minimum information about a genome sequence (MIGS) specification

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

List of new names and new combinations previously effectively, but not validly, published

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

The hierarchical system of the 'Alphaproteobacteria': description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Gene ontology: tool for the unification of biology

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Prodigal: prokaryotic gene recognition and translation initiation site identification

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Rfam: an RNA family database

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Improved prediction of signal peptides: SignalP 3.0

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Subunits of Cytochrome a-Type Terminal Oxidases Derived from Thiobacillus novellus and Nitrobacter agilis1

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Thiobacillus novelluscytochrome oxidase can separate some eucaryotic cytochromesc

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Cytochromes c of Nitrobacter winogradskyi and Thiobacillus novellus: structure, function and evolution

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

COPYCAT : cophylogenetic analysis tool

1 reference

https://api.crossref.org/works/10.4056%2FSOGS.3006378

21 January 2018

Identifiers

10.4056/SOGS.3006378

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