Functional classification of membrane transporters and channels based on filtered TM/non-TM amino acid composition (Q57814595)

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

21 January 2018

1 reference

A nearest neighbor approach for automated transporter prediction and categorization from protein sequences.

21 January 2018

1 reference

TransportTP: a two-phase classification approach for membrane transporter prediction and characterization

21 January 2018

1 reference

Combining evolutionary information and neural networks to predict protein secondary structure

21 January 2018

1 reference

A weighting method for predicting protein structural class from amino acid composition

21 January 2018

1 reference

The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

21 January 2018

1 reference

Prediction of protein subcellular locations by incorporating quasi-sequence-order effect

21 January 2018

1 reference

Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs.

21 January 2018

1 reference

Functional discrimination of membrane proteins using machine learning techniques

21 January 2018

1 reference

Prediction of transporter targets using efficient RBF networks with PSSM profiles and biochemical properties

21 January 2018

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Classifying Substrate Specificities of Membrane Transporters fromArabidopsis thaliana

21 January 2018

1 reference

ARAMEMNON, a novel database for Arabidopsis integral membrane proteins

21 January 2018

1 reference

Asymmetric amino acid compositions of transmembrane beta-strands

21 January 2018

1 reference

Transmembrane protein topology prediction using support vector machines

21 January 2018

1 reference

Prediction of membrane spanning segments and topology in beta-barrel membrane proteins at better accuracy

21 January 2018

1 reference

OPM: orientations of proteins in membranes database

21 January 2018

1 reference

Basic local alignment search tool

21 January 2018

1 reference

Integration of ranked lists via cross entropy Monte Carlo with applications to mRNA and microRNA Studies

21 January 2018

1 reference

Facilitated hexose transporters: new perspectives on form and function

21 January 2018

1 reference

The glucose transporter family: structure, function and tissue-specific expression.

21 January 2018

1 reference

The Crystal Structure of a Sodium Galactose Transporter Reveals Mechanistic Insights into Na+/Sugar Symport

21 January 2018

1 reference

Amino acid distributions in integral membrane protein structures

21 January 2018

1 reference

How proteins adapt to a membrane-water interface

21 January 2018

1 reference

Statistical analysis and exposure status classification of transmembrane beta barrel residues

21 January 2018

1 reference

Membrane proteins: from sequence to structure

21 January 2018

1 reference

Topography of membrane proteins

21 January 2018

1 reference

On the derivation of propensity scales for predicting exposed transmembrane residues of helical membrane proteins

21 January 2018

1 reference

Accurate prediction of the burial status of transmembrane residues of α-helix membrane protein by incorporating the structural and physicochemical features

21 January 2018

1 reference

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

21 January 2018

1 reference

Large differences in the helix propensities of alanine and glycine

21 January 2018

1 reference

Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions.

21 January 2018

1 reference

Helix packing in polytopic membrane proteins: role of glycine in transmembrane helix association

21 January 2018

1 reference

X-ray structure of a voltage-dependent K+ channel

21 January 2018

1 reference

Structural basis of Na(+)-independent and cooperative substrate/product antiport in CaiT

21 January 2018

1 reference