Mitogenomics of historical type specimens of Australasian turtles: clarification of taxonomic confusion and old mitochondrial introgression (Q64065302)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

title

Mitogenomics of historical type specimens of Australasian turtles: clarification of taxonomic confusion and old mitochondrial introgression (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

Scott Thomson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

Uwe Fritz

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

author name string

Christian Kehlmaier

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

Xiuwen Zhang

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

Patrick D Campbell

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

language of work or name

English

0 references

publication date

9 April 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

full work available at URL

2 May 2020

https://www.nature.com/articles/s41598-019-42310-x.pdf

file format

Portable Document Format

archive URL

https://web.archive.org/web/20201010100549/https://www.nature.com/articles/s41598-019-42310-x.pdf?error=cookies_not_supported&code=99882b03-3c4d-4eb2-8b91-51b636f5a8f0

0 references

published in

Scientific Reports

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

page(s)

5841

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

2 May 2020

copyright license

start time

9 April 2019

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Accelerated modern human-induced species losses: Entering the sixth mass extinction

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The future of ancient DNA: Technical advances and conceptual shifts

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Time to Spread Your Wings: A Review of the Avian Ancient DNA Field

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The Small and the Dead: A Review of Ancient DNA Studies Analysing Micromammal Species.

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A Return to Linnaeus's Focus on Diagnosis, Not Description: The Use of DNA Characters in the Formal Naming of Species

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Diversity of Australasian freshwater turtles, with an annotated synonymy and keys to species

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A New Species of Chelodina (Testudines: Pleurodira: Chelidae) from Northern Australia

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A New Species of Freshwater Turtle in the Genus Elseya (Testudines: Chelidae) from Central Coastal Queensland, Australia

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A new species and subgenus of Elseya (Testudines: Pleurodira: Chelidae) from New Guinea

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Myuchelys gen. nov. a new genus for Elseya latisternum and related forms of Australian freshwater turtle (Testudines: Pleurodira: Chelidae)

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A new species of freshwater turtle of the genus Elseya (Testudinata: Pleurodira: Chelidae) from the Northern Territory of Australia

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Taxonomy based on science is necessary for global conservation

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Resolution of the enigmatic phylogenetic relationship of the critically endangered Western Swamp Tortoise Pseudemydura umbrina (Pleurodira: Chelidae) using a complete mitochondrial genome

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Illumina sequencing library preparation for highly multiplexed target capture and sequencing

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Analysis of Whole Mitogenomes from Ancient Samples

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Multiplexed DNA sequence capture of mitochondrial genomes using PCR products

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Target enrichment via DNA hybridization capture

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Setting up an ancient DNA laboratory

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

BBMerge - Accurate paired shotgun read merging via overlap

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Using Tablet for visual exploration of second-generation sequencing data

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

MITOS: improved de novo metazoan mitochondrial genome annotation

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A complete mitochondrial genome sequence for the Australian turtle, Chelodina longicollis, obtained using 454-pyrosequencing

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Relationships within the Chelidae (Testudines: Pleurodira) of Australia and New Guinea

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Electrophoretic delineation of species boundaries within the genusChelodina(Testudines: Chelidae) of Australia, New Guinea and Indonesia

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The Validity of Chinemys megalocephala (Testudines: Batagurinae)

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Genetic and Morphological Variation Between Populations of the Pascagoula Map Turtle (Graptemys gibbonsi) in the Pearl and Pascagoula Rivers with Description of a New Species

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Validity of Taxonomic Changes for Turtles Proposed by Wells and Wellington

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Multilocus phylogeny and statistical biogeography clarify the evolutionary history of major lineages of turtles

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Phylogenomic analyses of 539 highly informative loci dates a fully resolved time tree for the major clades of living turtles (Testudines).

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

A Phylogeny for Australian Chelid Turtles Based on Allozyme Electrophoresis

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Mitochondrial variation among Australian freshwater turtles (genus Myuchelys), with special reference to the Endangered M. bellii

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Resolving the phylogenetic history of the short-necked turtles, genera Elseya and Myuchelys (Testudines: Chelidae) from Australia and New Guinea

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Phylogenetic Uncertainty and Taxonomic Re-revisions: An Example from the Australian Short-necked Turtles (Testudines: Chelidae)

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Early Cretaceous chelids from Lightning Ridge, New South Wales

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Species-Level Paraphyly and Polyphyly: Frequency, Causes, and Consequences, with Insights from Animal Mitochondrial DNA

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The incomplete natural history of mitochondria

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

LEAKY PREZYGOTIC ISOLATION AND POROUS GENOMES: RAPID INTROGRESSION OF MATERNALLY INHERITED DNA

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Mitochondrial DNA under siege in avian phylogeography

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The biogeography of mitochondrial and nuclear discordance in animals

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The on-again, off-again relationship between mitochondrial genomes and species boundaries

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Diversity of the Southeast Asian leaf turtle genusCyclemys: how many leaves on its tree of life?

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Integrative Taxonomy of Southeast Asian Snail-Eating Turtles (Geoemydidae: Malayemys) Reveals a New Species and Mitochondrial Introgression

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Conflicting mitochondrial and nuclear phylogenies for the widely disjunct Emys (Testudines: Emydidae) species complex, and what they tell us about biogeography and hybridization

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Molecular phylogeny and divergence of the Map Turtles (Emydidae: Graptemys).

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Mitonuclear discordance is caused by rampant mitochondrial introgression in Neodiprion (Hymenoptera: Diprionidae) sawflies

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Complete mitochondrial DNA replacement in a Lake Tanganyika cichlid fish.

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Ancient Mitochondrial Capture as Factor Promoting Mitonuclear Discordance in Freshwater Fishes: A Case Study in the Genus Squalius (Actinopterygii, Cyprinidae) in Greece

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Phylogeography of two European newt species--discordance between mtDNA and morphology

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Phylogenetic relationships of horned lizards (Phrynosoma) based on nuclear and mitochondrial data: evidence for a misleading mitochondrial gene tree

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Molecular phylogeography of the asp viper Vipera aspis (Linnaeus, 1758) in Italy: evidence for introgressive hybridization and mitochondrial DNA capture

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Hybrid origin of the Pliocene ancestor of wild goats

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Resolving a zoological mystery: the kouprey is a real species

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Combining multiple autosomal introns for studying shallow phylogeny and taxonomy of Laurasiatherian mammals: Application to the tribe Bovini (Cetartiodactyla, Bovidae).

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Multi-locus phylogeny of the tribe Tragelaphini (Mammalia, Bovidae) and species delimitation in bushbuck: Evidence for chromosomal speciation mediated by interspecific hybridization

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Electrophoretic delineation of species boundaries within the short-necked freshwater turtles of Australia (Testudines: Chelidae)

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

Diversity of North American map and sawback turtles (Testudines: Emydidae: Graptemys)

1 reference

https://api.crossref.org/works/10.1038%2FS41598-019-42310-X

7 January 2021

The hidden side of invasions: massive introgression by local genes

1 reference

12 December 2020

Elucidation of cryptic diversity in a widespread nearctic treefrog reveals episodes of mitochondrial gene capture as frogs diversified across a dynamic landscape

1 reference

12 December 2020

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

1 reference

12 December 2020

Ancient plant DNA in the genomic era

1 reference

12 December 2020

Phenotypic and life-history diversification in Amazonian frogs despite past introgressions

1 reference

12 December 2020

10.1038/S41598-019-42310-X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30967590%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

PubMed publication ID

30967590

1 reference