A Study into the ADP-Ribosylome of IFN-γ-Stimulated THP-1 Human Macrophage-like Cells Identifies ARTD8/PARP14 and ARTD9/PARP9 ADP-Ribosylation (Q64115893)

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scientific article published on 21 March 2019

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English	A Study into the ADP-Ribosylome of IFN-γ-Stimulated THP-1 Human Macrophage-like Cells Identifies ARTD8/PARP14 and ARTD9/PARP9 ADP-Ribosylation	scientific article published on 21 March 2019

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28 April 2020

A Study into the ADP-Ribosylome of IFN-γ-Stimulated THP-1 Human Macrophage-like Cells Identifies ARTD8/PARP14 and ARTD9/PARP9 ADP-Ribosylation (English)

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28 April 2020

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Michael O Hottiger

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28 April 2020

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28 April 2020

Masanori Aikawa

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Masanori Aikawa

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28 April 2020

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Hideyuki Higashi

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28 April 2020

Takashi Maejima

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28 April 2020

Lang Ho Lee

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28 April 2020

Yukiyoshi Yamazaki

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21 March 2019

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28 April 2020

Journal of Proteome Research

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28 April 2020

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28 April 2020

1607-1622

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28 April 2020

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18 June 2022

https://europepmc.org/article/PMC/6456868

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Activation of human monocyte-derived macrophages by interferon gamma is accompanied by increase of poly(ADP-ribose) polymerase activity

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Hydrogen peroxide-induced injury of cells and its prevention by inhibitors of poly(ADP-ribose) polymerase

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Tumor promoter phorbol-12-myristate-13-acetate induces poly ADP-ribosylation in human monocytes

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Studies on anti-poly(adenosine diphosphate ribose) antibody

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Enzymic adenosine diphosphate ribosylation of histone and poly adenosine diphosphate ribose synthesis in rat liver nuclei

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Splitting of the ribose-ribose linkage of poly(adenosine diphosphate-robose) by a calf thymus extract

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Chemical properties of elongation factor 2. Amino acid composition, NH 2 -terminal residue, and sulfhydryl reactivity

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Monoclonal antibodies to poly(adenosine diphosphate ribose) recognize different structures

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Poly(ADP-ribose) synthetase, a main acceptor of poly(ADP-ribose) in isolated nuclei

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Nicotinamide inhibits nitric oxide synthase mRNA induction in activated macrophages

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Inhibition of poly(ADP-ribose) polymerase attenuates inflammation in a model of chronic colitis

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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PANTHER: a library of protein families and subfamilies indexed by function

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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WebLogo: A Sequence Logo Generator

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https://pubmed.ncbi.nlm.nih.gov/30848916

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Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Identification and characterization of a mammalian 39-kDa poly(ADP-ribose) glycohydrolase

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Poly(ADP-ribose): novel functions for an old molecule

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Use of gas-phase fractionation to increase protein identifications : application to the peroxisome

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Proteome-wide identification of poly(ADP-ribose) binding proteins and poly(ADP-ribose)-associated protein complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tandem mass spectrometry investigation of ADP-ribosylated kemptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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PARP-14, a member of the B aggressive lymphoma family, transduces survival signals in primary B cells.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electron transfer dissociation facilitates sequencing of adenosine diphosphate-ribosylated peptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Toward a unified nomenclature for mammalian ADP-ribosyltransferases.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Identification of distinct amino acids as ADP-ribose acceptor sites by mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural Basis for DNA Damage-Dependent Poly(ADP-ribosyl)ation by Human PARP-1

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative proteomics profiling of the poly(ADP-ribose)-related response to genotoxic stress

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Quantitative proteomics and dynamic imaging reveal that G3BP-mediated stress granule assembly is poly(ADP-ribose)-dependent following exposure to MNNG-induced DNA alkylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Toward full peptide sequence coverage by dual fragmentation combining electron-transfer and higher-energy collision dissociation tandem mass spectrometry.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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STRING v9.1: protein-protein interaction networks, with increased coverage and integration

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Therapeutic applications of PARP inhibitors: anticancer therapy and beyond

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Macrodomain-containing proteins are new mono-ADP-ribosylhydrolases.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Macrodomain-containing proteins: regulating new intracellular functions of mono(ADP-ribosyl)ation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Site-specific characterization of the Asp- and Glu-ADP-ribosylated proteome

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Identification of ADP-ribosylated peptides and ADP-ribose acceptor sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Phosphoproteomic approach to characterize protein mono- and poly(ADP-ribosyl)ation sites from cells.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PARP12, an interferon-stimulated gene involved in the control of protein translation and inflammation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear ADP-Ribosylation and Its Role in Chromatin Plasticity, Cell Differentiation, and Epigenetics.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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The Promise of Proteomics for the Study of ADP-Ribosylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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Biology of Poly(ADP-Ribose) Polymerases: The Factotums of Cell Maintenance

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Optimization of LTQ-Orbitrap Mass Spectrometer Parameters for the Identification of ADP-Ribosylation Sites.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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2016 update of the PRIDE database and its related tools

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https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Proteome-wide identification of the endogenous ADP-ribosylome of mammalian cells and tissue.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Serine is a new target residue for endogenous ADP-ribosylation on histones.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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PARP9 and PARP14 cross-regulate macrophage activation via STAT1 ADP-ribosylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

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The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Combining Higher-Energy Collision Dissociation and Electron-Transfer/Higher-Energy Collision Dissociation Fragmentation in a Product-Dependent Manner Confidently Assigns Proteomewide ADP-Ribose Acceptor Sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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The conserved macrodomains of the non-structural proteins of Chikungunya virus and other pathogenic positive strand RNA viruses function as mono-ADP-ribosylhydrolases

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PARPs and ADP-ribosylation: recent advances linking molecular functions to biological outcomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New Quantitative Mass Spectrometry Approaches Reveal Different ADP-ribosylation Phases Dependent On the Levels of Oxidative Stress.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteome-Wide Identification of In Vivo ADP-Ribose Acceptor Sites by Liquid Chromatography-Tandem Mass Spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Cell-Line-Specific Atlas of PARP-Mediated Protein Asp/Glu-ADP-Ribosylation in Breast Cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteomic analyses identify ARH3 as a serine mono-ADP-ribosylhydrolase

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteomic Analysis of the Downstream Signaling Network of PARP1.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PARP14 Controls the Nuclear Accumulation of a Subset of Type I IFN–Inducible Proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comprehensive ADP-ribosylome analysis identifies tyrosine as an ADP-ribose acceptor site

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30848916

12 December 2020

based on heuristic

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Identifiers

10.1021/ACS.JPROTEOME.8B00895

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28 April 2020

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28 April 2020

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28 April 2020

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