Importance of the +73/294 interaction in Escherichia coli RNase P RNA substrate complexes for cleavage and metal ion coordination (Q78732832)

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16 December 2019

title

Importance of the +73/294 interaction in Escherichia coli RNase P RNA substrate complexes for cleavage and metal ion coordination (English)

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16 December 2019

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Mathias Brännvall

1

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16 December 2019

B M Fredrik Pettersson

series ordinal

2

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16 December 2019

Leif A Kirsebom

series ordinal

3

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16 December 2019

publication date

1 January 2003

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Journal of Molecular Biology

16 December 2019

number of pages

13

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based on heuristic

inferred from page(s)

published in

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16 December 2019

volume

325

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16 December 2019

issue

4

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16 December 2019

page(s)

697-709

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The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

16 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Metal ion cooperativity in ribozyme cleavage of RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Different cleavage sites are aligned differently in the active site of M1 RNA, the catalytic subunit of Escherichia coli RNase P.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Is there a discriminator site in transfer RNA?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Compilation of tRNA sequences and sequences of tRNA genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Manganese ions induce miscleavage in the Escherichia coli RNase P RNA-catalyzed reaction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The residue immediately upstream of the RNase P cleavage site is a positive determinant

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The P15-loop of Escherichia coli RNase P RNA is an autonomous divalent metal ion binding domain.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

RNase P RNA structure and cleavage reflect the primary structure of tRNA genes 1 1Edited by J. Karn

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Pathway of Activation by Magnesium Ions of Substrates for the Catalytic Subunit of RNase P from Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Several regions of a tRNA precursor determine the Escherichia coli RNase P cleavage site.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Important 2'-hydroxyl groups in model substrates for M1 RNA, the catalytic RNA subunit of RNase P from Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

On the wobble GoU and related pairs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

A novel tertiary interaction in M1 RNA, the catalytic subunit of Escherichia coli RNase P

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Lead-catalyzed cleavage of ribonuclease P RNA as a probe for integrity of tertiary structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Lead-ion-induced cleavage of RNase P RNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Residues in Escherichia coli RNase P RNA important for cleavage site selection and divalent metal ion binding.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Monitoring the structure of Escherichia coli RNase P RNA in the presence of various divalent metal ions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Guanosine 2-NH2 groups of Escherichia coli RNase P RNA involved in intramolecular tertiary contacts and direct interactions with tRNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Substrate binding and catalysis by ribonuclease P from cyanobacteria and Escherichia coli are affected differently by the 3' terminal CCA in tRNA precursors

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Cyanelle RNase P: RNA structure analysis and holoenzyme properties of an organellar ribonucleoprotein enzyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Correlation between processing efficiency for ribonuclease P minimal substrates and conformation of the nucleotide -1 at the cleavage position

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Improved free-energy parameters for predictions of RNA duplex stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Sequence dependence for the energetics of terminal mismatches in ribooligonucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Lead-catalyzed cleavage of yeast tRNAPhe mutants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Characterization of the Borrelia burgdorferi RNase P RNA gene reveals a novel tertiary interaction.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The crystal structure of yeast phenylalanine tRNA at 2.0 A resolution: cleavage by Mg(2+) in 15-year old crystals

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The NMR structure of 31mer RNA domain of Escherichia coli RNase P RNA using its non-uniformly deuterium labelled counterpart [the 'NMR-window' concept]

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Interaction of RNase P from Escherichia coli with pseudoknotted structures in viral RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Identification of individual nucleotides in the bacterial ribonuclease P ribozyme adjacent to the pre-tRNA cleavage site by short-range photo-cross-linking

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The track of the pre-tRNA 5' leader in the ribonuclease P ribozyme-substrate complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Identification of adenosine functional groups involved in substrate binding by the ribonuclease P ribozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Purine N7 groups that are crucial to the interaction of Escherichia coli rnase P RNA with tRNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Evolutionary variation in bacterial RNase P RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Structure and evolution of ribonuclease P RNA in Gram-positive bacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Additivity of mutational effects in proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Site-specific cleavage by metal ion cofactors and inhibitors of M1 RNA, the catalytic subunit of RNase P from Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Massive gene decay in the leprosy bacillus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Whole genome sequencing of meticillin-resistant Staphylococcus aureus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The complete genome sequence of Escherichia coli K-12

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The genome sequence of Rickettsia prowazekii and the origin of mitochondria

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Genome sequence of Yersinia pestis, the causative agent of plague

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

The Minimal Gene Complement of Mycoplasma genitalium

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

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1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901195-6

10.1016/S0022-2836(02)01195-6

7 January 2021

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16 December 2019

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