The role of histone ubiquitylation and deubiquitylation in gene expression as determined by the analysis of an HTB1(K123R) Saccharomyces cerevisiae strain (Q80188867)

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scientific article published on 15 February 2007

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English	The role of histone ubiquitylation and deubiquitylation in gene expression as determined by the analysis of an HTB1(K123R) Saccharomyces cerevisiae strain	scientific article published on 15 February 2007

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scholarly article

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29 December 2019

The role of histone ubiquitylation and deubiquitylation in gene expression as determined by the analysis of an HTB1(K123R) Saccharomyces cerevisiae strain (English)

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Saccharomyces cerevisiae

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4

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author name string

A Irina Mutiu

1

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Stephen M T Hoke

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Julie Genereaux

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29 December 2019

Christopher J Brandl

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publication date

15 February 2007

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Molecular Genetics and Genomics

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277

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5

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491-506

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29 December 2019

https://scigraph.springernature.com/pub.10.1007/s00438-007-0212-6

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Maintenance of low histone ubiquitylation by Ubp10 correlates with telomere-proximal Sir2 association and gene silencing.

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Computational identification of non-coding RNAs in Saccharomyces cerevisiae by comparative genomics

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Regulation of transcription by ubiquitination without proteolysis: Cdc34/SCF(Met30)-mediated inactivation of the transcription factor Met4.

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Rad6-dependent ubiquitination of histone H2B in yeast

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https://pubmed.ncbi.nlm.nih.gov/17447102

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Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast

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https://pubmed.ncbi.nlm.nih.gov/17447102

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Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1.

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https://pubmed.ncbi.nlm.nih.gov/17447102

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Cluster analysis and display of genome-wide expression patterns

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Tandem gene amplification mediates copper resistance in yeast

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https://pubmed.ncbi.nlm.nih.gov/17447102

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Functional discovery via a compendium of expression profiles

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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TOM1p, a yeast hect-domain protein which mediates transcriptional regulation through the ADA/SAGA coactivator complexes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Gene silencing: trans-histone regulatory pathway in chromatin

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Ubp10/Dot4p regulates the persistence of ubiquitinated histone H2B: distinct roles in telomeric silencing and general chromatin

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Transcriptional regulation by Lge1p requires a function independent of its role in histone H2B ubiquitination

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Adjacent upstream activation sequence elements synergistically regulate transcription of ADH2 in Saccharomyces cerevisiae

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Histone H2B ubiquitylation is associated with elongating RNA polymerase II

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Emerging roles of ubiquitin in transcription regulation

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Components of the SAGA histone acetyltransferase complex are required for repressed transcription of ARG1 in rich medium

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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A trithorax-group complex purified from Saccharomyces cerevisiae is required for methylation of histone H3

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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The deubiquitylation activity of Ubp8 is dependent upon Sgf11 and its association with the SAGA complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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COMPASS, a histone H3 (Lysine 4) methyltransferase required for telomeric silencing of gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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An unexpected role for ubiquitylation of a transcriptional activator

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Characterization of NGG1, a novel yeast gene required for glucose repression of GAL4p-regulated transcription.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Regulation of transcriptional activation domain function by ubiquitin

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Bre1, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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The E2 ubiquitin conjugase Rad6 is required for the ArgR/Mcm1 repression of ARG1 transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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The DNA damage checkpoint response requires histone H2B ubiquitination by Rad6-Bre1 and H3 methylation by Dot1.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Identification of high-copy disruptors of telomeric silencing in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Regulation of chromosome stability by the histone H2A variant Htz1, the Swr1 chromatin remodeling complex, and the histone acetyltransferase NuA4

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Chromatin disruption and modification

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https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Transcriptional profiling of ubp10 null mutant reveals altered subtelomeric gene expression and insurgence of oxidative stress response.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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RNA isolation from yeast using silica matrices.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

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Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dot1p modulates silencing in yeast by methylation of the nucleosome core

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a small molecule inhibitor of Sir2p

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Pax3 is essential for skeletal myogenesis and the expression of Six1 and Eya2.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Primary structure and transcription of an amplified genetic locus: the CUP1 locus of yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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A conserved sequence in histone H2A which is a ubiquitination site in higher eucaryotes is not required for growth in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Deubiquitination of histone H2B by a yeast acetyltransferase complex regulates transcription.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Histone ubiquitination: a tagging tail unfolds?

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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H2B ubiquitin protease Ubp8 and Sgf11 constitute a discrete functional module within the Saccharomyces cerevisiae SAGA complex.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histone H3 lysine 4 mono-methylation does not require ubiquitination of histone H2B.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Depletion of histone H4 and nucleosomes activates the PHO5 gene in Saccharomyces cerevisiae.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Functional analysis of H2B-Lys-123 ubiquitination in regulation of H3-Lys-4 methylation and recruitment of RNA polymerase II at the coding sequences of several active genes in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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Peptides accelerate their uptake by activating a ubiquitin-dependent proteolytic pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

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A conserved RING finger protein required for histone H2B monoubiquitination and cell size control.

1 reference

https://pubmed.ncbi.nlm.nih.gov/17447102

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00438-007-0212-6

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17447102%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17447102%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

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