The RFC clamp loader: structure and function (Q26825605)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22918590%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

title

The RFC clamp loader: structure and function (English)

2 references

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11 February 2020

2

1 reference

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11 February 2020

author name string

Nina Y Yao

series ordinal

1

1 reference

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11 February 2020

language of work or name

1 reference

1 January 2012

1 reference

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Sub-cellular biochemistry

11 February 2020

published in

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11 February 2020

volume

62

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11 February 2020

page(s)

259-279

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Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis

11 February 2020

cites work

1 reference

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CELLULAR DNA REPLICASES: Components and Dynamics at the Replication Fork

7 April 2017

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Biochemical characterization of DNA damage checkpoint complexes: clamp loader and clamp complexes with specificity for 5' recessed DNA

7 April 2017

1 reference

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Purification and characterization of human DNA damage checkpoint Rad complexes

7 April 2017

1 reference

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Crystal structure of an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus

7 April 2017

1 reference

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ATP hydrolysis catalyzed by human replication factor C requires participation of multiple subunits

7 April 2017

1 reference

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Regulation of DNA replication and repair proteins through interaction with the front side of proliferating cell nuclear antigen

7 April 2017

1 reference

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Homology in accessory proteins of replicative polymerases--E. coli to humans

7 April 2017

1 reference

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cDNAs encoding the large subunit of human replication factor C

7 April 2017

1 reference

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Anatomy of a DNA replication fork revealed by reconstitution of SV40 DNA replication in vitro

7 April 2017

1 reference

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Analysis of the role of PCNA-DNA contacts during clamp loading

7 April 2017

1 reference

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Structure of the DNA-bound BRCA1 C-terminal Region from Human Replication Factor C p140 and Model of the Protein-DNA Complex

7 April 2017

1 reference

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The Mechanism of ATP-Dependent Primer-Template Recognition by a Clamp Loader Complex

7 April 2017

1 reference

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Structure of a Sliding Clamp on DNA

7 April 2017

1 reference

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Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the -clamp

7 April 2017

1 reference

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Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III

7 April 2017

1 reference

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Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III

7 April 2017

1 reference

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Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage

7 April 2017

1 reference

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Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex

7 April 2017

2 references

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7 April 2017

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Crystal structure of the delta' subunit of the clamp-loader complex of E. coli DNA polymerase III

28 September 2017

1 reference

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Structure of the C-terminal region of p21(WAF1/CIP1) complexed with human PCNA

7 April 2017

1 reference

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Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

DNA polymerase delta is highly processive with proliferating cell nuclear antigen and undergoes collision release upon completing DNA.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Elg1 forms an alternative RFC complex important for DNA replication and genome integrity

7 April 2017

1 reference

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ELG1, a yeast gene required for genome stability, forms a complex related to replication factor C

7 April 2017

1 reference

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Identification of RFC(Ctf18p, Ctf8p, Dcc1p): an alternative RFC complex required for sister chromatid cohesion in S. cerevisiae

7 April 2017

1 reference

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A novel Rad24 checkpoint protein complex closely related to replication factor C.

7 April 2017

1 reference

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Characterization of the Five Replication Factor C Genes of Saccharomyces cerevisiae

7 April 2017

1 reference

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AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes

7 April 2017

1 reference

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Mechanism of proliferating cell nuclear antigen clamp opening by replication factor C

7 April 2017

1 reference

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Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex

7 April 2017

1 reference

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Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints

7 April 2017

1 reference

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Deletion analysis of the large subunit p140 in human replication factor C reveals regions required for complex formation and replication activities

7 April 2017

1 reference

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Mechanism of the sliding beta-clamp of DNA polymerase III holoenzyme

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Evolutionary relationships and structural mechanisms of AAA+ proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

The DNA binding domain of human DNA ligase I interacts with both nicked DNA and the DNA sliding clamps, PCNA and hRad9-hRad1-hHus1

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Motion of a DNA sliding clamp observed by single molecule fluorescence spectroscopy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

The checkpoint clamp activates Mec1 kinase during initiation of the DNA damage checkpoint

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Structure of an archaeal PCNA1-PCNA2-FEN1 complex: elucidating PCNA subunit and client enzyme specificity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Replication protein A directs loading of the DNA damage checkpoint clamp to 5'-DNA junctions

28 September 2017

1 reference

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The structure of a ring-opened proliferating cell nuclear antigen-replication factor C complex revealed by fluorescence energy transfer

28 September 2017

1 reference

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Clamp loaders and replication initiation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Out-of-plane motions in open sliding clamps: molecular dynamics simulations of eukaryotic and archaeal proliferating cell nuclear antigen

28 September 2017

1 reference

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Replication protein A-directed unloading of PCNA by the Ctf18 cohesion establishment complex

28 September 2017

1 reference

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DNA polymerase clamp loaders and DNA recognition

28 September 2017

1 reference

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The protein components and mechanism of eukaryotic Okazaki fragment maturation

28 September 2017

1 reference

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Archeal DNA replication: eukaryal proteins in a bacterial context

28 September 2017

1 reference

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Mechanism of loading the Escherichia coli DNA polymerase III beta sliding clamp on DNA. Bona fide primer/templates preferentially trigger the gamma complex to hydrolyze ATP and load the clamp

28 September 2017

1 reference

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Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2.

28 September 2017

1 reference

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Motors and switches: AAA+ machines within the replisome.

28 September 2017

1 reference

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A universal protein-protein interaction motif in the eubacterial DNA replication and repair systems.

28 September 2017

1 reference

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ATP utilization by yeast replication factor C. I. ATP-mediated interaction with DNA and with proliferating cell nuclear antigen

28 September 2017

1 reference

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Replisome-mediated DNA replication.

28 September 2017

1 reference

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The puzzle of PCNA's many partners

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Two modes of FEN1 binding to PCNA regulated by DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Overproduction in Escherichia coli and characterization of yeast replication factor C lacking the ligase homology domain

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Mutations in yeast proliferating cell nuclear antigen define distinct sites for interaction with DNA polymerase delta and DNA polymerase epsilon

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

A molecular switch in a replication machine defined by an internal competition for protein rings

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

A mutational analysis of the yeast proliferating cell nuclear antigen indicates distinct roles in DNA replication and DNA repair

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Synthesis of DNA containing the simian virus 40 origin of replication by the combined action of DNA polymerases alpha and delta

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Mechanism of beta clamp opening by the delta subunit of Escherichia coli DNA polymerase III holoenzyme.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Molecular mechanism and energetics of clamp assembly in Escherichia coli. The role of ATP hydrolysis when gamma complex loads beta on DNA.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

The internal workings of a DNA polymerase clamp-loading machine

31 May 2018

1 reference

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Functional interactions among the subunits of replication factor C potentiate and modulate its ATPase activity

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Clamp loading, unloading and intrinsic stability of the PCNA, beta and gp45 sliding clamps of human, E. coli and T4 replicases

31 May 2018

1 reference

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Mapping the interaction of DNA with the Escherichia coli DNA polymerase clamp loader complex

31 May 2018

1 reference

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Inhibition of protein interactions with the beta 2 sliding clamp of Escherichia coli DNA polymerase III by peptides from beta 2-binding proteins

28 November 2018

1 reference

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Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp: II. Uncoupling the beta and DNA binding activities of the gamma complex

28 November 2018

1 reference

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Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp: I. Two distinct activities for individual ATP sites in the gamma complex.

28 November 2018

1 reference

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Replication factor C clamp loader subunit arrangement within the circular pentamer and its attachment points to proliferating cell nuclear antigen.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

Ordered ATP hydrolysis in the gamma complex clamp loader AAA+ machine.

28 November 2018

1 reference

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ATP utilization by yeast replication factor C. II. Multiple stepwise ATP binding events are required to load proliferating cell nuclear antigen onto primed DNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

ATP utilization by yeast replication factor C. III. The ATP-binding domains of Rfc2, Rfc3, and Rfc4 are essential for DNA recognition and clamp loading

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3711244

The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli

28 November 2018

1 reference

12 December 2020

The replication factor C clamp loader requires arginine finger sensors to drive DNA binding and proliferating cell nuclear antigen loading

1 reference

12 December 2020

The Pol32 Subunit of DNA Polymerase δ Contains Separable Domains for Processive Replication and Proliferating Cell Nuclear Antigen (PCNA) Binding

1 reference

12 December 2020

Efficient in vitro replication of double-stranded DNA templates by a purified T4 bacteriophage replication system

1 reference

12 December 2020

Identification of cellular components required for SV40 DNA replication in vitro

1 reference

12 December 2020

10.1007/978-94-007-4572-8_14

Identifiers

DOI

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22918590%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22918590%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PubMed publication ID

22918590

2 references