MicroRNA-target interactions: new insights from genome-wide approaches (Q27000642)

Chanseok Shin

series ordinal

2

1 reference

language of work or name

1 reference

October 2012

1 reference

Annals of the New York Academy of Sciences

1 October 2012

2 references

8 September 2019

14 November 2020

3 references

8 September 2019

14 November 2020

1271

1 reference

page(s)

118-28

1 reference

Creative Commons Attribution 2.5 Generic

copyright license

2 references

Europe PubMed Central

8 September 2019

Europe PubMed Central

miRNA-mediated gene silencing by translational repression followed by mRNA deadenylation and decay

14 November 2020

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MicroRNAs: target recognition and regulatory functions

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Deadenylation is a widespread effect of miRNA regulation

21 March 2017

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Most mammalian mRNAs are conserved targets of microRNAs

21 March 2017

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A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence

21 March 2017

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Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites

21 March 2017

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RNA-binding protein Dnd1 inhibits microRNA access to target mRNA

21 March 2017

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MicroRNA targeting specificity in mammals: determinants beyond seed pairing

21 March 2017

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Transcripts targeted by the microRNA-16 family cooperatively regulate cell cycle progression

21 March 2017

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mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes

21 March 2017

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A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing

21 March 2017

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A large-scale analysis of mRNA polyadenylation of human and mouse genes

21 March 2017

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21 March 2017

Human MicroRNA targets

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The microRNAs of Caenorhabditis elegans

21 March 2017

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The Structure of Human Argonaute-2 in Complex with miR-20a

21 March 2017

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The Crystal Structure of Human Argonaute2

21 March 2017

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Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex

21 March 2017

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Structure of the guide-strand-containing argonaute silencing complex

21 March 2017

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Mammalian microRNAs predominantly act to decrease target mRNA levels

21 March 2017

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21 March 2017

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Widespread changes in protein synthesis induced by microRNAs

21 March 2017

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21 March 2017

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RAS is regulated by the let-7 microRNA family

21 March 2017

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Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs

21 March 2017

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Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

7 April 2017

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21 March 2017

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An extensive class of small RNAs in Caenorhabditis elegans

21 March 2017

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An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans

21 March 2017

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Identification of novel genes coding for small expressed RNAs

21 March 2017

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Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA

21 March 2017

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The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans

21 March 2017

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Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans

21 March 2017

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The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

21 March 2017

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The widespread regulation of microRNA biogenesis, function and decay

21 March 2017

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21 March 2017

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CLIP identifies Nova-regulated RNA networks in the brain

21 March 2017

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The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation

21 March 2017

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MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation

21 March 2017

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The let-7 microRNA represses cell proliferation pathways in human cells

21 March 2017

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Relief of microRNA-mediated translational repression in human cells subjected to stress

21 March 2017

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21 March 2017

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A hierarchy of regulatory genes controls a larva-to-adult developmental switch in C. elegans

21 March 2017

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The role of site accessibility in microRNA target recognition

21 March 2017

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Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs

7 April 2017

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The widespread impact of mammalian MicroRNAs on mRNA repression and evolution

7 April 2017

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Gene silencing by microRNAs: contributions of translational repression and mRNA decay

7 April 2017

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Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells

7 April 2017

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MicroRNAs direct rapid deadenylation of mRNA

7 April 2017

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Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution

7 April 2017

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Micro RNAs are complementary to 3' UTR sequence motifs that mediate negative post-transcriptional regulation

7 April 2017

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MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship

7 April 2017

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An alternative mode of microRNA target recognition

28 September 2017

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Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability

28 September 2017

1 reference

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Global analysis of the mammalian RNA degradome reveals widespread miRNA-dependent and miRNA-independent endonucleolytic cleavage

28 September 2017

1 reference

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Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs.

28 September 2017

1 reference

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Desperately seeking microRNA targets

28 September 2017

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Expanding the microRNA targeting code: functional sites with centered pairing

28 September 2017

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Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases

28 September 2017

1 reference

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Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA

28 September 2017

1 reference

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Biological basis for restriction of microRNA targets to the 3' untranslated region in mammalian mRNAs

28 September 2017

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Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

28 September 2017

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A biochemical approach to identifying microRNA targets

28 September 2017

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28 September 2017

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Distance constraints between microRNA target sites dictate efficacy and cooperativity

28 September 2017

1 reference

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Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein

28 September 2017

1 reference

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Kinetic analysis of the RNAi enzyme complex

28 September 2017

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Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae

28 September 2017

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Mutations that lead to reiterations in the cell lineages of C. elegans

28 September 2017

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Determinants of targeting by endogenous and exogenous microRNAs and siRNAs

28 September 2017

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Isolation of microRNA targets by miRNP immunopurification

31 May 2018

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Structural insights into mRNA recognition from a PIWI domain-siRNA guide complex

31 May 2018

1 reference

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Potent effect of target structure on microRNA function.

31 May 2018

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Predicting microRNA targets and functions: traps for the unwary.

21 January 2018

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Functional and quantitative proteomics using SILAC

21 January 2018

1 reference

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RNAi-Mediated Allelic trans-Interaction at the Imprinted Rtl1/Peg11 Locus

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23050973

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Perfect seed pairing is not a generally reliable predictor for miRNA-target interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/23050973

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1111/J.1749-6632.2012.06745.X

1 reference

3075047

3075047

1 reference

1 reference

1 reference