Crystal structure of bacteriophage T4 5' nuclease in complex with a branched DNA reveals how flap endonuclease-1 family nucleases bind their substrates (Q27647139)

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English	Crystal structure of bacteriophage T4 5' nuclease in complex with a branched DNA reveals how flap endonuclease-1 family nucleases bind their substrates	scientific article

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scholarly article

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Crystal structure of bacteriophage T4 5' nuclease in complex with a branched DNA reveals how flap endonuclease-1 family nucleases bind their substrates (English)

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crystal structure

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1 reference

based on heuristic

inferred from title

author name string

Juliette M Devos

1

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Stephen J Tomanicek

2

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Charles E Jones

3

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Nancy G Nossal

4

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Timothy C Mueser

5

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language of work or name

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publication date

26 October 2007

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Journal of Biological Chemistry

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282

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43

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31713-24

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Flap endonuclease 1: a novel tumour suppresser protein

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https://api.crossref.org/works/10.1074%2FJBC.M703209200

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Flap endonuclease 1: a central component of DNA metabolism

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https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Multiple but dissectible functions of FEN-1 nucleases in nucleic acid processing, genome stability and diseases.

1 reference

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The 5'-exonuclease activity of bacteriophage T4 RNase H is stimulated by the T4 gene 32 single-stranded DNA-binding protein, but its flap endonuclease is inhibited

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Either bacteriophage T4 RNase H or Escherichia coli DNA polymerase I is essential for phage replication

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

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Stimulation of RTH1 nuclease of the yeast Saccharomyces cerevisiae by replication protein A.

1 reference

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Maturation of bacteriophage T4 lagging strand fragments depends on interaction of T4 RNase H with T4 32 protein rather than the T4 gene 45 clamp

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Two modes of FEN1 binding to PCNA regulated by DNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Lagging strand DNA synthesis at the eukaryotic replication fork involves binding and stimulation of FEN-1 by proliferating cell nuclear antigen

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Mechanism whereby proliferating cell nuclear antigen stimulates flap endonuclease 1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Werner syndrome protein interacts with human flap endonuclease 1 and stimulates its cleavage activity

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

The interaction site of Flap Endonuclease-1 with WRN helicase suggests a coordination of WRN and PCNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Stimulation of flap endonuclease-1 by the Bloom's syndrome protein

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

The human Rad9-Rad1-Hus1 checkpoint complex stimulates flap endonuclease 1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Idling by DNA polymerase delta maintains a ligatable nick during lagging-strand DNA replication

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

On the roles of Saccharomyces cerevisiae Dna2p and Flap endonuclease 1 in Okazaki fragment processing

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Okazaki fragment processing: modulation of the strand displacement activity of DNA polymerase delta by the concerted action of replication protein A, proliferating cell nuclear antigen, and flap endonuclease-1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Structural basis for FEN-1 substrate specificity and PCNA-mediated activation in DNA replication and repair

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

The crystal structure of flap endonuclease-1 from Methanococcus jannaschii

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Crystal structure of Thermus aquaticus DNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Molecular structure and novel DNA binding sites located in loops of flap endonuclease-1 from Pyrococcus horikoshii

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Structural basis for recruitment of human flap endonuclease 1 to PCNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Bacteriophage T4 32 protein is required for helicase-dependent leading strand synthesis when the helicase is loaded by the T4 59 helicase-loading protein

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Solvent content of protein crystals

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Interaction interface of human flap endonuclease-1 with its DNA substrates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Common fold in helix-hairpin-helix proteins

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Making and breaking nucleic acids: two-Mg2+-ion catalysis and substrate specificity

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Dynamic evidence for metal ion catalysis in the reaction mediated by a flap endonuclease.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Roles of divalent metal ions in flap endonuclease-substrate interactions.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Structural and catalytic chemistry of magnesium-dependent enzymes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Bacteriophage T4 RNase H removes both RNA primers and adjacent DNA from the 5' end of lagging strand fragments

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

PCNA binding through a conserved motif

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Crystal structure of a replication fork single-stranded DNA binding protein (T4 gp32) complexed to DNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Interactions of mutant and wild-type flap endonucleases with oligonucleotide substrates suggest an alternative model of DNA binding

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Modeling of Flap Endonuclease Interactions with DNA Substrate

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M703209200

21 January 2018

Identifiers

10.1074/JBC.M703209200

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