Novel multiscale modeling tool applied to Pseudomonas aeruginosa biofilm formation (Q30416783)

19 August 2017

Novel multiscale modeling tool applied to Pseudomonas aeruginosa biofilm formation (English)

1 reference

19 August 2017

Pseudomonas aeruginosa

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Matthew B Biggs

1

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Jason A. Papin

object named as

Jason A Papin

series ordinal

2

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language of work or name

English

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publication date

17 October 2013

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19 August 2017

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19 August 2017

8

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19 August 2017

10

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19 August 2017

e78011

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Creative Commons Attribution 4.0 International

19 August 2017

start time

17 October 2013

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Multiscale computational models of complex biological systems

1 reference

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TypA is involved in virulence, antimicrobial resistance and biofilm formation in Pseudomonas aeruginosa

20 June 2018

1 reference

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The problem of pattern and scale in ecology: what have we learned in 20 years?

20 June 2018

1 reference

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Growth dependence of conjugation explains limited plasmid invasion in biofilms: an individual-based modelling study

20 June 2018

1 reference

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Ensuring congruency in multiscale modeling: towards linking agent based and continuum biomechanical models of arterial adaptation

20 June 2018

1 reference

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Toward a multi-scale computational model of arterial adaptation in hypertension: verification of a multi-cell agent based model.

20 June 2018

1 reference

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iDynoMiCS: next-generation individual-based modelling of biofilms

20 June 2018

1 reference

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The application of flux balance analysis in systems biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Metabolic network analysis of Pseudomonas aeruginosa during chronic cystic fibrosis lung infection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Anaerobic adaptation in Pseudomonas aeruginosa: definition of the Anr and Dnr regulons

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Role of gluconic acid production in the regulation of biocontrol traits of Pseudomonas fluorescens CHA0.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Gene expression characteristics of a cystic fibrosis epidemic strain of Pseudomonas aeruginosa during biofilm and planktonic growth

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Multiscale computational analysis of Xenopus laevis morphogenesis reveals key insights of systems-level behavior

20 June 2018

1 reference

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Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

20 June 2018

1 reference

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Oxygen limitation contributes to antibiotic tolerance of Pseudomonas aeruginosa in biofilms.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

20 June 2018

Diffusion in biofilms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Dynamic flux balance analysis of diauxic growth in Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Spatial physiological heterogeneity in Pseudomonas aeruginosa biofilm is determined by oxygen availability

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Bacteria can form interconnected microcolonies when a self-excreted product reduces their surface motility: evidence from individual-based model simulations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

Pseudomonas aeruginosa biofilms in the respiratory tract of cystic fibrosis patients.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3798466

10.1371/JOURNAL.PONE.0078011

26 November 2018

Identifiers

DOI

1 reference

19 August 2017

0 references

1 reference

19 August 2017

1 reference

PMCID

3798466