ChiloDB: a genomic and transcriptome database for an important rice insect pest Chilo suppressalis (Q30487116)

16 October 2017

ChiloDB: a genomic and transcriptome database for an important rice insect pest Chilo suppressalis (English)

1 reference

16 October 2017

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Chilo suppressalis

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Chuanlin Yin

1

1 reference

16 October 2017

Ying Liu

2

1 reference

16 October 2017

Jinding Liu

3

1 reference

16 October 2017

Huamei Xiao

4

1 reference

16 October 2017

Shuiqing Huang

5

1 reference

16 October 2017

Yongjun Lin

6

1 reference

16 October 2017

Zhaojun Han

7

1 reference

16 October 2017

Fei Li

8

1 reference

16 October 2017

4 July 2014

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16 October 2017

1 reference

16 October 2017

2014

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OMIGA: Optimized Maker-Based Insect Genome Annotation

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

DBM-DB: the diamondback moth genome database.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Genome-wide analysis reveals the expansion of Cytochrome P450 genes associated with xenobiotic metabolism in rice striped stem borer, Chilo suppressalis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Data, information, knowledge and principle: back to metabolism in KEGG

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostella

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Using GBrowse 2.0 to visualize and share next-generation sequence data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

MonarchBase: the monarch butterfly genome database

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

FlyBase: improvements to the bibliography

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Exploring the midgut transcriptome and brush border membrane vesicle proteome of the rice stem borer, Chilo suppressalis (Walker)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Using OrthoMCL to assign proteins to OrthoMCL-DB groups or to cluster proteomes into new ortholog groups

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

A k-mer scheme to predict piRNAs and characterize locust piRNAs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Responses of striped stem borer, Chilo suppressalis (Lepidoptera: Pyralidae), from Taiwan to a range of insecticides

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

De novo assembly of human genomes with massively parallel short read sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

BLAST+: architecture and applications

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

KAIKObase: an integrated silkworm genome database and data mining tool

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

SilkDB v2.0: a platform for silkworm (Bombyx mori ) genome biology

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

GMODWeb: a web framework for the Generic Model Organism Database.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

NCBI BLAST: a better web interface

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Discovering microRNAs from deep sequencing data using miRDeep

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Jasmonate and salicylate induce expression of herbivore cytochrome P450 genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

The generic genome browser: a building block for a model organism system database

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Basic local alignment search tool

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4082153

Development of insect-resistant transgenic rice with Cry1C*-free endosperm

28 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAU065

Full-length transcriptome assembly from RNA-Seq data without a reference genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAU065

Using and understanding RepeatMasker.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAU065

A universal classification of eukaryotic transposable elements implemented in Repbase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAU065

De novo identification of repeat families in large genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAU065

21 January 2018

Identifiers

DOI

10.1093/DATABASE/BAU065

1 reference

16 October 2017

1 reference

16 October 2017

PubMed publication ID

24997141

1 reference